Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09405 ATGGTGGGCTCAGGAACAACAACAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAAATGTATGTCTCAACTCAGATTGGACTTACTCTGTCTTCTGGACCATTCGTCCTCGCCCAAGAGTCAGAGGTGGCAATGGGTGCAAGGTTGGGGATGATAATGGTAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGTGGAAGGGCTTCAGATTGTCTTGAAGAGCTTGATGGAGAGGATCCTGTCAGAAAATCCTTCAGCAAAATGTCAATTCAGTTATATAATTATGGAGAAGGGTTGATGGGAAAGGTTACATCTGATAAGTGCCACAAGTGGGTCTTCAAAGAGCCCACAGAATGTGAACCTAATATTTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCACCTGAATGGATAGATCAGTTTGAGTCAGGAATTCAGACAATAGCTGTAATTCAAGCTGGGCATGGCCTTCTCCAACTTGGTTCTTGCAAGATTATTCCTGAAGATCTCCATTTTGTGCTAAGAATGAGACACACTTTTGAATCACTAGGCTATCAATCTGGATTCTACCTCTCCCAACTCTTCTCTTCAACTAGGAACTCCTCCTCTTCTACTTCAATTCCTTCAAAACCATCCACCATTCCAATTGGTCCATCTCCTCCACTCCTCAACTGGGGTCAGAGGCCACTTGGGTCTGCTACTTCCATGCTATCCTCACCCAATTTTCAACATGCAGCCAGAATGGGGTTCCCACATGCCAAAGATGAGGCCCATATGTTTCTCATGCCTAATGCATCCGAAGCTGCAAGAAGGGAAGACATGATAGGGGAGCATGAAAAAAGTGACATAAAATGGCCAAATGGGTTGTCTTTCTTCAATGCACTCACTGGAAGAACTGATGATGCTAAGCTTTTGTTCAATCCAGAAAGCATGGGGAGCAAACTAGGTGAGCAAAATCTCCACCACCCTCTTAATCAAACTCCAAATTCAGCTGCCTCCAATGAGTTCTTGAGCTTAGATAACCACCCAGAAGGGACAAGGAAAATGGACAAGTTTAAGAGGAGCTTCACACTACCTGCAAGAGTGGCTTCTTCAACTTCATCTACTTCAATGGATCACCATCAACAAACAGCTATGGAGTATAGGAATTCAGGAGGGGGTATGTACCCGGATGTCATGGAGACCTTTTTAGAGTGA 1221 0.4496 MVGSGTTTDRSKEAVGMMALHEALRNVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRASDCLEELDGEDPVRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWIDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNSSSSTSIPSKPSTIPIGPSPPLLNWGQRPLGSATSMLSSPNFQHAARMGFPHAKDEAHMFLMPNASEAARREDMIGEHEKSDIKWPNGLSFFNALTGRTDDAKLLFNPESMGSKLGEQNLHHPLNQTPNSAASNEFLSLDNHPEGTRKMDKFKRSFTLPARVASSTSSTSMDHHQQTAMEYRNSGGGMYPDVMETFLE. 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09405 406 PANTHER GB|AAF34833.1 1 406 IPR044170 -
Seca3g09405 406 MobiDBLite consensus disorder prediction 208 229 - -
Seca3g09405 406 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 188 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09405 Seca-Chr3 234210844 234213469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09405 21 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 29.851 2.93e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09405 - - gmx:100789006 671.774