Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09403 ATGTCGAAGCATACAACTCATGGCTTTCACTTGGTGAAGGGAAGATCAGATCACGAAATGGAAGACTATCATGTTGCTCAATTTAAGCAAATTGATAACAATGAGTTGGGTTTATTTGCAATATTTGATGGCCACTCAGGTCACAGTGTACCTGATTACTTGCGGTCTCATTTGTTTGATAATATCATAAAAGAGCCTGACTTCTGGACAGACCCTGCAGAAGCAATCAAGAGAGCATATAATGTAACTGATTCTACTATTTTAGAGAAATCAGGTGAATTGGGTAGAGGGGGTTCAACTGCAGTTACAGCAATATTGATCAATTGTCAGAAGCTAGTAGTGGCAAATATTGGTGATTCTCGGGCTGTCTTATGCAAGAATGGAGTGGCCAAACAACTATCAGTGGATCATGAACCAAACACAGAAAGTGAGGATATAAAAAACAGAGGTGGTTTTGTATCAAACTTCCCAGGTGACGTTCCACGGGTTGATGGGCAGTTGGCAGTGTCAAGGGCATTTGGTGACAAAAGCCTAAAGAAACATTTGAGCTCAGAACCATATGTGACAGTGGAGATAATAGATGATGATGCAGAGTTTGTTATATTAGCCAGTGATGGGTTATGGAAGGTAATGTCAAATCAAGAAGCAGTTGATGCCATCAGAAATATAAAGGATACTCGTTCTGCAGCAAAGTACCTTACTGAAGAAGCACGTAACAGGAAAAGCTCAGATGATATCTCTTGCGTTGTCGTCAGATTTCAGTGA 765 0.4039 MSKHTTHGFHLVKGRSDHEMEDYHVAQFKQIDNNELGLFAIFDGHSGHSVPDYLRSHLFDNIIKEPDFWTDPAEAIKRAYNVTDSTILEKSGELGRGGSTAVTAILINCQKLVVANIGDSRAVLCKNGVAKQLSVDHEPNTESEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSEPYVTVEIIDDDAEFVILASDGLWKVMSNQEAVDAIRNIKDTRSAAKYLTEEARNRKSSDDISCVVVRFQ. 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09403 254 FunFam Probable protein phosphatase 2C 39 1 254 - -
Seca3g09403 254 SUPERFAMILY PP2C-like 4 253 IPR036457 -
Seca3g09403 254 SMART PP2C_4 1 251 IPR001932 -
Seca3g09403 254 Gene3D - 2 254 IPR036457 -
Seca3g09403 254 Pfam Protein phosphatase 2C 16 246 IPR001932 -
Seca3g09403 254 CDD PP2Cc 7 253 IPR001932 -
Seca3g09403 254 ProSiteProfiles PPM-type phosphatase domain profile. 6 253 IPR001932 -
Seca3g09403 254 PANTHER PROTEIN PHOSPHATASE 7 253 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09403 Seca-Chr3 234170283 234173984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09403 1 254 PP2C-type Phosphatase Gene Family AT3G15260 77.953 6.45e-153 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09403 K17506 - gmx:100787942 459.914