Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09320 ATGGCAATTTGTAGTCGTCAATTGTTCACTTTCCCTGCTTTCTTCTGCCTTGCCCTTCTCCTTTTTTCTGCTACCGAGGTTCATATTGGTAATGCTGATCAAGTTTGTGAAAGGTCTAGTGGAACATTTTCAGGGCCTTGTTTCAACAGTGAGCCATGTCATAACCAGTGCACAGAGAGAGAGAATGCAATAGGGGGCGCCTGTTACGTTTTCCATTGCTACTGTCTCTATGAATGTCGCGACTGA 246 0.4472 MAICSRQLFTFPAFFCLALLLFSATEVHIGNADQVCERSSGTFSGPCFNSEPCHNQCTERENAIGGACYVFHCYCLYECRD. 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09320 81 Pfam Gamma-thionin family 34 79 - -
Seca3g09320 81 SUPERFAMILY Scorpion toxin-like 35 79 IPR036574 -
Seca3g09320 81 SMART gth_4 35 79 IPR003614 GO:0006952
Seca3g09320 81 ProSitePatterns Gamma-thionins family signature. 34 57 IPR008176 GO:0006952
Seca3g09320 81 Gene3D - 34 79 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09320 Seca-Chr3 233022822 233023182 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09320 9 79 Plant Defensins Gene Families AT1G19610 36.000 3.90e-11 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09320 - K16681 lja:Lj3g3v0720000.1 61.6178