Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09319 ATGGCAATTTGTAGTCGTCAATTGTCCACTTTCCCTGTTTTCTTCTGCCTTGCTCTTCTCCTTTTTGCTGCTACTGAGGTTCATATTGGTAATGCTGAACAAATTTGTGGAAAGCCTAGTGGAACATTTTCAGGGCCTTGTTTCAGCAGTAGCCAATGCTCTAACCAGTGCAGAGAGAGAGAGAATGCAGTAGGGGGTGCCTGTTACGTTTTGGCTTGTTACTGTCACTATGGCTGTCATGGCGACTGA 249 0.4538 MAICSRQLSTFPVFFCLALLLFAATEVHIGNAEQICGKPSGTFSGPCFSSSQCSNQCRERENAVGGACYVLACYCHYGCHGD. 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09319 82 Pfam Gamma-thionin family 34 79 - -
Seca3g09319 82 PANTHER DEFENSIN-LIKE PROTEIN 1 13 76 - -
Seca3g09319 82 ProSitePatterns Gamma-thionins family signature. 34 57 IPR008176 GO:0006952
Seca3g09319 82 Gene3D - 34 79 IPR036574 -
Seca3g09319 82 SMART gth_4 35 79 IPR003614 GO:0006952
Seca3g09319 82 SUPERFAMILY Scorpion toxin-like 35 79 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09319 Seca-Chr3 233020182 233021242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09319 13 79 Plant Defensins Gene Families AT2G26010 45.833 1.05e-10 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09319 - K00854 lja:Lj3g3v0720000.1 58.151