Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09288 ATGAGCTTGAGTATGAGTATGAGCTACTGCGGCGGTTACGGCCTTCGGCTTCAATCTTGCAGAATCGCAAACTGCAATTTTGACCGTGATACTCGTCATGGCAAGCAAATTGTTCCTATCAATGCGCACAAAAAACCTTCTGAACCTGAAAATTGTCTTCAGTCAAAGTGGAAGTCTAATGGCAATAACATTGGGATGTTCATTGGTGCCATGACAGCGGCGCACTTGGTTGCTCCAGTCACTGCAAAAGCTGAAGTGGCTGCTTCTGTTTATGCTTTGGCAGATGGAAGCCTCAATGACTGGTTTGGAGGCTTTCTTTTTTCAGCTGGACAACAGGCTAATGAAGCTGTTCAGGGCCAACTATCCTCCCTCAGTTTCACTAGTTTGGCAGTAATTTATGGAGCAGGGCTTGTAACCAGCCTTTCTCCCTGTACACTTAGTGTGTTACCACTGACCCTTGGTTACATTGGGGCATTTGGCTCTGGCAAAAGCAAATCAGAGGTTATTGGAGATTCAATTGCATTTTCCTTAGGTCTTGCAACCACTTTAGCACTGTTGGGTATAGCAGCATCATTTGCAGGAAAGGCTTATGGACAGATTGGGCAAGGGTTACCTTTGGCTGCTTCTGGGTTGGCAGTAATTATGGGTCTGAACCTTCTTGAGATCATTGAATTACGACTCCCCTCATTCTTTGACAGTTTTGATCCACGTTCAGCGGCTGCCAATCTCCCATCAAGTGTGCAAGCATACCTGGCCGGGCTTACATTTGCATTAGCTGCCTCACCTTGTAGTACACCTGTTCTTGCCACTCTTCTGGGATATGTCGCTGCATCCAAGGATCCAGTAATAGGAGGAAGCTTACTTTTGACATACACAACTGGCTATGTTTCTCCCTTACTCCTGGCTGCTTCTTTTGCTGGAGCGTTACAGAGCTTGCTTTCATTTCGCAAGTACTCAGCATGGATCAATCCTATAAGCGGAGCAATGCTGTTAGGAGGTGGTGTATATACTTTCTTAGATAGGCTGTTCCCAGTCACTATGGCATTGTAG 1050 0.46 MSLSMSMSYCGGYGLRLQSCRIANCNFDRDTRHGKQIVPINAHKKPSEPENCLQSKWKSNGNNIGMFIGAMTAAHLVAPVTAKAEVAASVYALADGSLNDWFGGFLFSAGQQANEAVQGQLSSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSKSEVIGDSIAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDSFDPRSAAANLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYVSPLLLAASFAGALQSLLSFRKYSAWINPISGAMLLGGGVYTFLDRLFPVTMAL. 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09288 349 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 123 347 - -
Seca3g09288 349 Pfam Cytochrome C biogenesis protein transmembrane region 133 339 IPR003834 GO:0016020|GO:0017004
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09288 Seca-Chr3 232635225 232640412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09288 1 344 Chloroplast and Mitochondria Gene Families AT5G54290 68.555 1.12e-143 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09288 - - gmx:100815609 591.652