Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09231 ATGGTATTTTCTGAGAGAAAATCTGTTCCTTATGGGAAATTGTCTCAAGAATTAGCACCTTCATCTGCACCCATGGCTCTACAACAATCAGAGCAAGAGGAGCCATTGGAAGAAGAAGCACCTACACTTTCTCAACTGAACAACCAAAACTCAGTACTCTCACTCACCCTTGATGAATTCCAATCCAAGAGTGGAAAGAACTTTGGGTCCATGAACATGGATGAATTCCTTGCCAGCATTTTGAGCTCTGATGATAACCAAGTTAACCCACCTTCTCCCCATGATGAAGCAGCTGCTCAGAGCAAAAGTGTTGCAACAGAACCCACCACTCCTCCTACTCAGCAAGGCTCATTCTCTGTCCCTCCTCCAATTTGCAAGAAAACTGTGGATGAAGTTTGGTCTGAGATCCATAAAGGCCAACCCCAAAAGAATATTGAAGCTAAAAACCTTGATAGAATTGAGAGACTCAAGAAGCAACAAACACTTGGGGAGATGACTTTGGAGGATTTCCTAATAAAAGCTGGTGTAGTACAAGCATCATCATCATTAGCATCAAAGACTAATTCTCCTCAACCTAGAACTACAATGCAATTTCAGAATCAGACTGCAGGTAATAATACTGCACCACTTAATATACCATTGAATTCAAGTTATGGGTTATTGAGGCCTGCAATGGGGATAGGATTTTCTACCCAACATGATATAGGGAACTCTGTTTCTAGCAATGGCCTTGGAACATACCAAATGTTGTCACAGAATAACAGCTTAGTAATAAGGGACCCCCCTACAAGTTGTGCTGTAGAGAATTGTCAAAGCTTACAAGAGTCAAGTGGGAGTGGTAGTAGGAAGAGGATAATTGATGGTCCTCCTGAAGTGGTAGTGGAGCGAAGGCAACGCAGAATGTTGAAGAATAGAGAATCAGCAGCACGCTCTAGAGCAAGAAAACAGAAAACCTTTGAAATGTGA 966 0.4203 MVFSERKSVPYGKLSQELAPSSAPMALQQSEQEEPLEEEAPTLSQLNNQNSVLSLTLDEFQSKSGKNFGSMNMDEFLASILSSDDNQVNPPSPHDEAAAQSKSVATEPTTPPTQQGSFSVPPPICKKTVDEVWSEIHKGQPQKNIEAKNLDRIERLKKQQTLGEMTLEDFLIKAGVVQASSSLASKTNSPQPRTTMQFQNQTAGNNTAPLNIPLNSSYGLLRPAMGIGFSTQHDIGNSVSSNGLGTYQMLSQNNSLVIRDPPTSCAVENCQSLQESSGSGSRKRIIDGPPEVVVERRQRRMLKNRESAARSRARKQKTFEM. 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09231 321 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 299 314 IPR004827 GO:0003700|GO:0006355
Seca3g09231 321 MobiDBLite consensus disorder prediction 1 47 - -
Seca3g09231 321 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 47 316 IPR043452 GO:0003700|GO:0045893
Seca3g09231 321 Coils Coil 43 63 - -
Seca3g09231 321 MobiDBLite consensus disorder prediction 83 123 - -
Seca3g09231 321 Gene3D - 294 320 - -
Seca3g09231 321 MobiDBLite consensus disorder prediction 300 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09231 Seca-Chr3 231761439 231764714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09231 36 306 bZIP Transcription Factor Family AT3G44460 40.071 5.74e-49 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09231 K14432 - gmx:100799576 295.434