Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09229 ATGATTACTACATGTAGATTTGTGTGTTGCAAGGAGGGTGAATGTAAAAAGAATAAACGAGACTATTTGATTTCTAATCCTAGACTTGAAACTCGAAGTAATTGTCAAGTAAGATTAGGCATCACACTTGTAAGAGAATTTGGAAAATATAAAGTGCATGATTTTGTTCATGAGCATAATCATGTTTTGCATCTTCAAGAGACCATTCACATGTTAGCATGTCAAAGCAAATTATCTCAAATGCAAGCTTATGAGATTGACTTGGCAAATAATTCAGGCATAAATCAAAAGACTACATTTGAATTAATGAGCAACGGAGTGAGCCACAGAGTGAGCCATGGAGTGAGCGGCCAGACAATTGGATTTGCAGAGATGACTGAGCCACGGAGATTTGCAGAGATGACTGAGCCACGGAGTTGCAGTAAGCCAATCTTGTTGCCTATGTGA 447 0.3826 MITTCRFVCCKEGECKKNKRDYLISNPRLETRSNCQVRLGITLVREFGKYKVHDFVHEHNHVLHLQETIHMLACQSKLSQMQAYEIDLANNSGINQKTTFELMSNGVSHRVSHGVSGQTIGFAEMTEPRRFAEMTEPRSCSKPILLPM. 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09229 148 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 113 - -
Seca3g09229 148 Pfam FAR1 DNA-binding domain 2 63 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09229 Seca-Chr3 231757027 231757473 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g09229 FAR1 3.2e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09229 - - adu:107465301 129.798