Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09081 ATGGATAGCAGAGGCAGCAACCAAAGTCAATCTTGTGGTTTTGTATTACACAGCATCAAAGGTCGATGGTTCTCTCTTTATGCGGCATTTTTAATCACGGCAGGAAGTGGAACGGTATACTTATTTGGGACCTATTCCACAGAGATAATTGTTAGCATGGGATATGATCAATCTGAACTCAGGAAATTAACCTTCTATAAAGACTTTGGTTCAAACTTTGCTGTGCTTAATGGCCTTCTTGCGGAGATAGCCCCATCATGGCTTCTCTTCCTTCTCAGTGCTGGTATGAATTTTTGGGGCTACTTCATGATATGGTTGGCCGTTACCAAGAAGATAGCCAAGCCTGAGATATGGCAAATGTGCTTCTTCATCTTTATAGGAGCCAACGCCCCAAACTTTTCAGACACACGAGCTATTGTCACAAGCGTTAGAAATTTCCCTGAGAGCAGAGGTGTTGTATTGGGCCTTTTAAAGAGTTATATTGGACTGAGTGGACCCATCGTCAGCCTATTGCATTGGGCCTTGTATGGAAAAGATCTCAAATCTCTAATCTTATTCATTGCATGGTTCCCTGCTTTCTTAGATATTGTGTTCATGTTCACATTTCAAGAAAAGAAGTTCACTAGGCAACCTCAAGAGATGAGGGTCTTCTATCATTACCTTTACGTATCAATTGCCATGGCAGTGTTTGTCATGGTTATGACCATTTCTGAAAGGCACGTTAAATTCTCTTCAACGAGCTATGTAGGAAGCGCTATGGTAGTCTTTGTATTCCTTTTCATCCTCCCTCTCTTAATCTCCCTTAGAGAAGAACATTTTGATTGGACCATAAACAATTCTTATTCCAAGACTAACAATAACATTGAGATTTCACGAGGAATTCAGTCCAAAGAGAATGGCTATGTAGGTGAAAGTAGAATCTCATCCTTCTTCAATAACATATGGAACAAACCAGGGAGAGGGGGAGACCACACTGTCTTACAAGCAATCTTAAGCACTGATATGATGTATTTATTTTTTACAACTGCTTGTGGATTAGGGGCAGGTTTGACCGCTATAAATAACTTGAAACAAATTGGTGAAGCACTAGGATACCCCACAGAAACCATACAAGCATTTGCATCTCTTGTGAACATATGGAATTATGTAGGTAGAGTATACTCTGGTTTTGTATCTGAGTATTTGTTACGCAAATACAAAATCCCTCGTCCAGCCATGTTAACTTTCATGTTAGCCTTATCGAGCGTGGGGTACATCCTTATTGCATTTCCATTTCGCGGTTCCATCTATTTGGCATGTGTCATCATTGGGTTCTCATACGGTTCACAGTTGCCATTAGTAAATGCAATCATTTCTGAGTTGTTTGGGCTCAAGCACTACTCGACCTTGTTCAATTGTGGGCAGTTTGCGAGCCCTCTAGGTGCATATATCTTGAATGCCAAGATTGTTCAACCTAATTACCAAAGGATGGCGGAGAGTTTGATAATGGATGAAACTAGTGTGGACAATTTGATATGCTCAGGGGAGGTATGCTTCAAAGATTCTTTCACAGTTTTAGCATCTGTTGCAATCCTTGGAGGTTTTATTTCTCAAATTTTGATGGAAAGAACAAGGAAATTTTATGAGGGAGACATATATAAAAGGTTTAGAGATCCTCCACAGAATTCTGCGGAGGAACAAACATCCCCTACTCGAGAAACTTCATAA 1707 0.4025 MDSRGSNQSQSCGFVLHSIKGRWFSLYAAFLITAGSGTVYLFGTYSTEIIVSMGYDQSELRKLTFYKDFGSNFAVLNGLLAEIAPSWLLFLLSAGMNFWGYFMIWLAVTKKIAKPEIWQMCFFIFIGANAPNFSDTRAIVTSVRNFPESRGVVLGLLKSYIGLSGPIVSLLHWALYGKDLKSLILFIAWFPAFLDIVFMFTFQEKKFTRQPQEMRVFYHYLYVSIAMAVFVMVMTISERHVKFSSTSYVGSAMVVFVFLFILPLLISLREEHFDWTINNSYSKTNNNIEISRGIQSKENGYVGESRISSFFNNIWNKPGRGGDHTVLQAILSTDMMYLFFTTACGLGAGLTAINNLKQIGEALGYPTETIQAFASLVNIWNYVGRVYSGFVSEYLLRKYKIPRPAMLTFMLALSSVGYILIAFPFRGSIYLACVIIGFSYGSQLPLVNAIISELFGLKHYSTLFNCGQFASPLGAYILNAKIVQPNYQRMAESLIMDETSVDNLICSGEVCFKDSFTVLASVAILGGFISQILMERTRKFYEGDIYKRFRDPPQNSAEEQTSPTRETS. 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09081 568 Gene3D MFS general substrate transporter like domains 331 540 IPR036259 -
Seca3g09081 568 Pfam Nodulin-like 22 267 IPR010658 -
Seca3g09081 568 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 23 544 - -
Seca3g09081 568 SUPERFAMILY MFS general substrate transporter 22 539 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09081 Seca-Chr3 229140311 229142017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09081 8 558 Nodulin-like Gene Family AT2G28120 50.709 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09081 - - lja:Lj3g3v3053370.1 906.746