Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09061 ATGGCCAAGCTCAGTGCAGGTGTCAGAAACAGCAGCAAGAAGGGTGGGAGTGGCATTGTGAAATTCAAGTTTGTGGTTGAGAAGCTTCACAAGAGGCTCTTACTTGGGAGAAATAAAGGAAGCACTGACTTTGAGAGATACGAAGAAGTGCCAGAAGATGTGAAGGAAGGACACTTCGCTGTGATTGCTGAAGGTGGAGAGGAACCAAAGAGATTCGTTCTTCCACTAAGCTGTTTAACAAACCCAATGTTTTTGAGGCTTTTGGAGAGAGCAGCAGAAGAGTATGGGTTTGATCATGAAGGTGCACTAACCATTCCATGCAGACCTTCTGAACTTGAGAGGATATTAGCTCAGCAATGGCAGCAGCAAACTACTGCGTGTAATAAATCATCGTTTTTCTATAACTACTGA 411 0.4404 MAKLSAGVRNSSKKGGSGIVKFKFVVEKLHKRLLLGRNKGSTDFERYEEVPEDVKEGHFAVIAEGGEEPKRFVLPLSCLTNPMFLRLLERAAEEYGFDHEGALTIPCRPSELERILAQQWQQQTTACNKSSFFYNY. 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09061 136 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 115 IPR003676 GO:0009733
Seca3g09061 136 Pfam Auxin responsive protein 45 117 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09061 Seca-Chr3 228870089 228870499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09061 5 107 Calmodulin-binding Proteins AT3G43120 37.736 3.02e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09061 K14488 - gmx:100794278 174.096