Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g09030 ATGTCTTCAACTTATCTGATTGCTCTTTGTCAAGCAATAGATTTGAGGCATTTGGAGGAGAATCTAAAGAACACAGTTAAGAATACGGTGAGCCAAGTAGCTAGAAAAGTCCTGACTGTGGGTGTCAATGGGGAGGTTCATCCTTCCAAGTCCTGTGAGAAAGATTTGCTCAAAGTGGTTGATTGTGAGTATGTATTTGCTTACATTGATGACCCTTGCAATGCTACATACCCACTTATGCAAAAGCTTAGGCAAGTGCTTGTGGAACATGCATTGAGGACTAGTAATGGTTTGAAAAGTATAAATGCTTCCATCATTCTGAAGATTGGTGCCTTCGAGGAGGAATTGAAAAGAGTCTTGCCCAAAGATGTTCAATCTACAAGGAATGCCTTTGAAAAGGGGAGTTCAATGAGTCCTAACAAAATAAAGGAATGCAGGTCCTACCCGCTGTACAAGTTTGTCAGAGAAGAATTGGGGACAGAGTTCTTAACCGGAGAGAAAATGAAATCCCCTGGAGAAGATTTTGATAAAGTTTTTAATGCAATTACTCAAGGAAAAATAATAGATGCAATGTTCGCATGCCTCAGGGATTGGGATGGTACTCCTCTTCCTATATGTTGGAGCTCCTCATAG 633 0.406 MSSTYLIALCQAIDLRHLEENLKNTVKNTVSQVARKVLTVGVNGEVHPSKSCEKDLLKVVDCEYVFAYIDDPCNATYPLMQKLRQVLVEHALRTSNGLKSINASIILKIGAFEEELKRVLPKDVQSTRNAFEKGSSMSPNKIKECRSYPLYKFVREELGTEFLTGEKMKSPGEDFDKVFNAITQGKIIDAMFACLRDWDGTPLPICWSSS. 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g09030 210 SUPERFAMILY L-aspartase-like 1 206 IPR008948 GO:0003824
Seca3g09030 210 Gene3D - 19 140 IPR023144 -
Seca3g09030 210 PANTHER HISTIDINE AMMONIA-LYASE 1 206 IPR001106 -
Seca3g09030 210 FunFam Phenylalanine ammonia-lyase 19 140 - -
Seca3g09030 210 Gene3D Fumarase/aspartase (Central domain) 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g09030 Seca-Chr3 228101808 228102440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g09030 1 206 Monolignol Biosynthesis Gene Families AT2G37040 69.903 2.08e-105 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g09030 K10775 - tpra:123898449 337.035