Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08901 ATGGGACGGAGAAAACGCTTCTTCTTCAAACCCCCACCACCGGTAACACCAACATTCCTACCTCCTGTTCCTGTTGCTCAAATCACGAACATCTCCGATAATGATTCATTAAGAGATGAAAAGATTGAAACCGCTCGCGCCCTCATAACCAAATGGGATCCTATTCCCACTTCCAACCAACCTCAATCTCCCTTCAACGCCAAAACCACCGCTCCTCTTTTCAGCAACACCCGCCAAGAAGCCAAACAGTACCTAGATTCCATCAAGAGCCTACAATCCTCTATGCAGAACCTCATCGCACGGGATTCCTCCTCCGAGGAGCTCGTCCAGGCTCATTTCTTGATGCAACTCGCCATGAAGAGGCTTGAGACGGAATTCTATCGGATATTAGCCGAAAACAAGGCCAAATTGGACCCTGAAACCTTCTCCATCCTTTTCTCCTCTGAACGCCGGAGCAGCGTCTCCGATTACGACGAAGAATCCTTCGACGATGAGTTCTCCGAGTCTGTCATGGCGGATTTGAAAGCCATTGCGGACTGTATGGTTTCCGCCGGGTACAGCAAAGAGTGCATCAGAATTTACACGCTCGTGAGAAAGTCGATTGTTGATGAGGCACTAAGCAATCTCGGAGTGGAGAGGCTCAGCGTTTCTCAGGTTCAGAAGATGGAATGGGAGGTGCTTGAGCCGAAGATTAAGTGCTGGCTGAGTTCCATCAAGGTCGCCGTCGGTACTCTGTTTCACGGCGAGAAAACTCTCTGCGAAACTGTATTCGGTGAATCGAAGAAAAAGATCGCGGAGTCCTGTTTCGTTGAGGTTTGCAAAGAGGCCGCCACGTGCCTGTTTAGATTCCCGCGCATCGTGGCAAAGTGCAAGAAAAATCCTGAGAAAATGTTCAGGACGCTGGACATGTACGAAGCAATCTCTCAGAATTGGAAACGAATTGAATCCACGTTCTCGTTCGAATCAACCTCTGCGATTAAATCACAGGCCATCGCTTCAAAGGCGAAGCTCGCGAAGGCCGTTAGGAAGATGCTATCGAACTTCGAATCGGCGATTCAGAAGGAATCCTCGAAGATTCCGGTGCCAGGTGGAGGAGTCCACCCGCTCACGCGCTACGTCATGAATTACATCGCGTTGCTAGCCGAGTACAGACGCGCGCTCGCTGTAATAGTCGCCGATTGGCCGCAGAATCCGTTGCCGGAGTCTTACTACCGCAATCCGGATCGCGTGGAAAAGAATCCGCCGTCGGAGACTGCGGAGCGTGTCGCGTGGCTGATACTTTTGCTTCTCTGTAAGATCGACGGGAAATCAGAGCTCTACAAGGACGTTGCACTCTCTTACCTGTTCCTCGCGAACAACATGCAATACGTCGTCGTAAAGGTCCGCAAATCGAAACTAAGGCTTCTTCTCGGTGAGGATTGGTTGAAGAAGCAAGAGTGGAAGGTAAAAGACTACATCTCCAAGTACGAGCGTATGGGATGGAGCAAGGTGCTTTCGTCGCTGCCGGAAAATCCGACGGCGGAGATACAAGCGGAGCAGGCAACGGCTATGTTCCAGAGTTTCGAGGCCGCATTTTATGAAGCTTGCAGGGTACAGTACTCGTGGGTCGTATCCGACCCGAAACTTCGAGACGAAATCGAAGCTTCGATAGCTTTGAAGGTGGTGCCCAGGTACCTGGAATTCTACAATAAGTATTGGGTCGGGTCGGAGTCAGAGGCAAGTTTTTCACCCGATGATTTGGCGAATTATCTTTCTGACATTTTGTATGGGCTAGAGGGACACTCGGGTAGCGTTTCGTCGGAATCTTCTTCTATTCGTTTTCGCTTCAAACGCCCTTAA 1839 0.5035 MGRRKRFFFKPPPPVTPTFLPPVPVAQITNISDNDSLRDEKIETARALITKWDPIPTSNQPQSPFNAKTTAPLFSNTRQEAKQYLDSIKSLQSSMQNLIARDSSSEELVQAHFLMQLAMKRLETEFYRILAENKAKLDPETFSILFSSERRSSVSDYDEESFDDEFSESVMADLKAIADCMVSAGYSKECIRIYTLVRKSIVDEALSNLGVERLSVSQVQKMEWEVLEPKIKCWLSSIKVAVGTLFHGEKTLCETVFGESKKKIAESCFVEVCKEAATCLFRFPRIVAKCKKNPEKMFRTLDMYEAISQNWKRIESTFSFESTSAIKSQAIASKAKLAKAVRKMLSNFESAIQKESSKIPVPGGGVHPLTRYVMNYIALLAEYRRALAVIVADWPQNPLPESYYRNPDRVEKNPPSETAERVAWLILLLLCKIDGKSELYKDVALSYLFLANNMQYVVVKVRKSKLRLLLGEDWLKKQEWKVKDYISKYERMGWSKVLSSLPENPTAEIQAEQATAMFQSFEAAFYEACRVQYSWVVSDPKLRDEIEASIALKVVPRYLEFYNKYWVGSESEASFSPDDLANYLSDILYGLEGHSGSVSSESSSIRFRFKRP. 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08901 612 Coils Coil 81 101 - -
Seca3g08901 612 Gene3D Exocyst complex component Exo70 65 594 - -
Seca3g08901 612 Pfam Exo70 exocyst complex subunit 233 586 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca3g08901 612 PANTHER EXOCYST COMPLEX PROTEIN EXO70 31 584 IPR004140 GO:0000145|GO:0006887
Seca3g08901 612 SUPERFAMILY Cullin repeat-like 73 587 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08901 Seca-Chr3 225337508 225339346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08901 1 590 EXO70 exocyst subunit family AT5G59730 46.388 1.75e-176 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08901 K07195 - gmx:100801773 701.434