Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08851 ATGGAAACAACCAAGCTTAACAGAGACATTTCCAATAAATTTAAGAAACATACTGATGTTTTGGAGTTAATTAGTATGGAGAAGGATTTATTGCTTAAGTTTCTAAGAAATTTAGATGTTGGTGGGAAAAACTTCCATCAAGCTTCCCTCAACAGAACAAGAAGATTGACAAAATCAGGGTCATTTCCTTTAACCGCACCTTCACCGGTGAAAAACTTCAGCTCTAGTACCTTCAAACACAAGCAATACGAAATTTGGGCCTTCCCCAAGGGAGAAAAGTTGCTTGCTGGTACTCATGAACCAAATAATTCTGCATCCAGTTTTGTGAAAGATGTTTCTTATGAGAATCCAATGCCTTCAGTGAATGATCTTGGCTCAGATAGTGCCATGAAACAAAAACCAAGTGTTTCTTCAAGGGCTTCTGAAGGGTTAAATCACAAAGGGTGGAATCAATTGGTTCTTCATCAATTCAAAGTTATAAAACAGAAGATAATACATGCTCTTGTGGAGTTCAAAAAAAGTGGTTACCAAACTTCTGTCCAAGCCATCCACCATAGAGCTTCACTTGAATATAGCATCACCAATGATGAGAAAGAGATCTCACAAAGCTTAGATGATGGCATGGCTCAAGAATACAAAAAGAATAAAAGCTCCAATGACACTAAAGCTTCTGAATATGATTCCGATAAACATGAAGCTCGCCTAATACGAAGAACTTCCTCTCTTAATGAATCGGTGGATAGATATACTCAGTTGTTTGAGAAAAGCTTCAGAAAAGATGACAAGTGGCAAAGCTCAAAGTCTAAAAGCTTAAGATTGACAAATGAGGATAAGATTCACAAGACTGGGCTTGCTCCTGTGTTTTCCAGAAGCAATTTGTCTATGCCTAATCTTGAGTCCTTAGGCTTCATTTTACATGAGGCACTTAATGATACAAATGACATGGGGAACACAGTGGAAACTGATGATCATGTTCAAAGAAAATCAGGGAGCCTTCCTTTAAAGAATGACAAATCACTTGATCATATTAAAGAGGAAGAAATTGAGGAAACAGTAGAAGGGAGTGGCAAGGATGTGAATCCCAGTCATTTATCTGATAAGATTGTGGAGAAAATTGATGAAGAAATTACCTGTGACCAAAAGGAGGACACACATGAGCCAGCGGTGGGAGATGAAAGTTTTCCTCAACAAAAAGAGGAAATAAGTATGACTTCCTATCTTAGCAATGAGGTGATGATATCTCTTGAAACTAGCTGTGAAGACAATACAACCAGCCATGCAGAAGGTAGAGAATTGAATACCAAAGGCTCCACATTGGCCGAATTGGAGACTGATTTACCAAGCAGAGAAAGTGCAACAACCAATGACACATGCAAGAATCCTGACAATCATTTCCAGCTCTTCAAATCAGATGCAGACAATGATTTCAATTTCATATATGTGAAAAATGTTCTTGAACTTTCAGGCTTCATGAGAAATGAGCAGATTCAAATGCGATACTCAGTAGACCAGCCACTAAGGCCCTCCTTATTCATGGATTTGGATGCGGCTATCCACAAGGATATTGAATCCTATGGAGAAGAGATCATCAACCCATATGATCACCAGCTTCTTTTTAACTTAGTTAATGAGGTGCTCCTTGAAATATATGAGATTTCACCAACTTACTTCCCAAGGCCCTTCTCCTTCAACTACCACCTCCATCCAATGCCTAAGGGACACTATCTTCTTAAAGAAGTATGGAAAAGTATTAATTCATACCTGAGCTTGAAACCAGAGCTGGATCAAACATTAGATGATGTTGTGGGTCGTGATTTGGCAAAAAGAAGTGGCTGGATGAACCTTCAACAGGAAGAGGAGTGTGTAGCACTTGAACTAGAGGAGATGATCATGGAAGATTTATTAGATGAAGTTATCTTCTCATGA 1926 0.3863 METTKLNRDISNKFKKHTDVLELISMEKDLLLKFLRNLDVGGKNFHQASLNRTRRLTKSGSFPLTAPSPVKNFSSSTFKHKQYEIWAFPKGEKLLAGTHEPNNSASSFVKDVSYENPMPSVNDLGSDSAMKQKPSVSSRASEGLNHKGWNQLVLHQFKVIKQKIIHALVEFKKSGYQTSVQAIHHRASLEYSITNDEKEISQSLDDGMAQEYKKNKSSNDTKASEYDSDKHEARLIRRTSSLNESVDRYTQLFEKSFRKDDKWQSSKSKSLRLTNEDKIHKTGLAPVFSRSNLSMPNLESLGFILHEALNDTNDMGNTVETDDHVQRKSGSLPLKNDKSLDHIKEEEIEETVEGSGKDVNPSHLSDKIVEKIDEEITCDQKEDTHEPAVGDESFPQQKEEISMTSYLSNEVMISLETSCEDNTTSHAEGRELNTKGSTLAELETDLPSRESATTNDTCKNPDNHFQLFKSDADNDFNFIYVKNVLELSGFMRNEQIQMRYSVDQPLRPSLFMDLDAAIHKDIESYGEEIINPYDHQLLFNLVNEVLLEIYEISPTYFPRPFSFNYHLHPMPKGHYLLKEVWKSINSYLSLKPELDQTLDDVVGRDLAKRSGWMNLQQEEECVALELEEMIMEDLLDEVIFS. 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08851 641 Pfam Domain of unknown function (DUF4378) 478 637 IPR025486 -
Seca3g08851 641 PANTHER PROTEIN TRM32 3 641 IPR044257 -
Seca3g08851 641 MobiDBLite consensus disorder prediction 119 142 - -
Seca3g08851 641 MobiDBLite consensus disorder prediction 211 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08851 Seca-Chr3 224609015 224612657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08851 19 631 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 29.921 2.03e-45 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08851 - - gmx:100784103 813.913