Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08824 ATGTCCATGGCTTCATCCGTTGCTTCCTCCAAAACCAAAACCCTAAAGTCAACGTTCCTCATTCTGTGCCTCTTAGCCTCTATCCTGTATCCAATCAACGCTCACGGAGGAAGCCATGGTGCTGACAACGGTTCAGACAATGTAAGTTTGCGTTCCAAGAGTCTGATCTTAGTAAAAATATGGTGTTTGATCATCATGTTTGTGAGCACTTTCGCCGGTGGGGTTTCCCCTTACTTCTACCGTTGGAATGAGACCTTTCTTCTATTGGGGACTCAGTTTGCTGGTGGGGTTTTCCTTGGAACCTCTATGATCCATTTCTTGAGCGATTCCAATGAAACCTTTAAAGACCTCACCACAAAAACTTACCCTTTTGCCTTCATGCTGGCTTCCGTTGGATACCTTCTCACAATGTTAGGTGACTGTGTTGTGGTTTTTGTCACAAGTAATAGTCAGAGGGAAGACAAAGTGGTGGAACTGGAAGGAGGGAGAACTCCCCAAGAACAAGAGCAAGTCAGAGAGTTGGCAATGGATACAACTAACCCTGTGTTCATGAAGACTTCATCTGTGGGAGACACCATTCTTCTCATCCTTGCACTTTGTTTCCATTCCGTTTTTGAAGGCATTGCTGTTGGAGTTTCAGGTACTAAGGCAGAAGCATGGAGGAACTTATGGACAATATCCCTGCACAAGATATTTGCTGCTATTGCAATGGGAATTGCTTTGCTTAGGATGTTACCAAAGAGACCCTTAGTAACCACAGTAGCATATTCTTTTGCCTTTGGTATTTCAAGCCCCATTGGGGTGGGGATTGGAATTGCCATTGACGCCACAACACAAGGACGCACAGCAGATTGGATGTATGCTATATCTATGGGAATGGCTTGTGGGGTTTTCATCTATGTTGCTATCAATCATTTAATATCCAAAGGCTTCAAACCGCAGAGGAAGAGCCCTTTCGACACTCCCTGGTTTAGGTTTCTCGCTGTGCTCTCTGGTGTGGCTGTTATAGCTGTTGTCATGATCTGGGACTGA 1032 0.4496 MSMASSVASSKTKTLKSTFLILCLLASILYPINAHGGSHGADNGSDNVSLRSKSLILVKIWCLIIMFVSTFAGGVSPYFYRWNETFLLLGTQFAGGVFLGTSMIHFLSDSNETFKDLTTKTYPFAFMLASVGYLLTMLGDCVVVFVTSNSQREDKVVELEGGRTPQEQEQVRELAMDTTNPVFMKTSSVGDTILLILALCFHSVFEGIAVGVSGTKAEAWRNLWTISLHKIFAAIAMGIALLRMLPKRPLVTTVAYSFAFGISSPIGVGIGIAIDATTQGRTADWMYAISMGMACGVFIYVAINHLISKGFKPQRKSPFDTPWFRFLAVLSGVAVIAVVMIWD. 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08824 343 Pfam ZIP Zinc transporter 154 339 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Seca3g08824 343 Pfam ZIP Zinc transporter 57 152 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Seca3g08824 343 PANTHER ZINC/IRON TRANSPORTER 58 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08824 Seca-Chr3 224032948 224035152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08824 12 343 Inorganic Solute Cotransporters AT5G59520 56.303 4.82e-133 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08824 K14709 - gmx:100776614 539.265