Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08816 ATGATCATTGAGAAACATATTAGGCAGCCAGAAGAAATGGAAGAGCTGTTGGCATGTTATTTGAATTTAAATGCTGATGAGTATCATGATCTTATCATCAAAGTATTCCGCAAGGTATGGTTTGACATGAGCCAATATGGTTTGGGTATTAAATCAAACATGCAATGGTTTTACTATGACAATGAAACTGTGCTTATGAACCCACTAGACCATTACAAGTAA 222 0.3514 MIIEKHIRQPEEMEELLACYLNLNADEYHDLIIKVFRKVWFDMSQYGLGIKSNMQWFYYDNETVLMNPLDHYK. 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08816 73 ProSiteProfiles OVATE domain profile. 1 42 IPR006458 -
Seca3g08816 73 Pfam Transcriptional repressor, ovate 1 43 IPR006458 -
Seca3g08816 73 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 44 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08816 Seca-Chr3 223946543 223946764 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca3g08816 Ovate 5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08816 - - lja:Lj6g3v1970210.1 108.997