Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08806 ATGTCTTCTGTGGCCACCCCTAATCAACCGTATGCCACTCAAATGATTTTTGTTGATGAGGAGGAGGGAAGGATCGAGTCTACCATGCCTAAACAACATATGGCCAAATTTGTTAACTCGGTTATGGATGAGGTTGTTTATAGTATGGACGAAGCCTATAACTTATACCAAGAACATGCTTTCAAAATGGGCTTTAGTGTAAGAAAAGGGAGGCAACTGTATCACGATAATGAGAAGAAGATCACACGCTTGAAAGAATTTTATTGCTCCAAGGAAGGGTTTAAGAATAATGAAGCCGGAGGTGAAGTGGCTCATGAAAGAGCAGATTCAAGGACAAATTGCAAAGCCATGGTGAGATTTAATGTGAACAAGGATGGAGTGTGA 384 0.4089 MSSVATPNQPYATQMIFVDEEEGRIESTMPKQHMAKFVNSVMDEVVYSMDEAYNLYQEHAFKMGFSVRKGRQLYHDNEKKITRLKEFYCSKEGFKNNEAGGEVAHERADSRTNCKAMVRFNVNKDGV. 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08806 127 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 48 126 - -
Seca3g08806 127 Pfam FAR1 DNA-binding domain 55 126 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08806 Seca-Chr3 223812066 223813465 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g08806 FAR1 7.7e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08806 - - tpra:123905334 143.28