Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08786 ATGGAGTACTCAGTGGAAGCTTTGGAGAGAGATCTAAAAAACATGAGGAAGTATTATGGGAGTGGAAAAACAAAGGAAGCATCATGGAGAGAATTACAGCTTAAAGGTTTGCATAATTTCCTCATGGAGAAAGAGGAGGAAATCTTAAAGGCCCTCAAGCAGGATTTGGGGAAGCATCATGTTGAGGCTTATAGAGATGAGGTGGGAACGTTAATGAAGTCCTTAAATTTGGCAAGGAAGTCCTTGAAAAAATGGATGGCAAGCAAAGAGGCCAAACTGCCCAAAATAGCATTGCTTTCCAGTGCAGAAATAGTTTCTGAGCCACTTGGTCTTGTCCTCATAATCTCATCATGGAATTTTCCCATTGGACTGTCCTTGGAGCCACTAATTGGAGCTGTAGCTGCTGGAAACAGTGTAGTTTTAAAGCCTTCAGAGATTTCCCCTGCTTGTTCGTCTCTTCTAGCCACTGTCCTCCCATATTACTTGGACAATAATGGCATTAACGTCATACAAGGAGGGCCAGAAGTGGGCGAGCAACTCTTGCAACAAAGATGGGACAAGATCTTCTTCACAGGAAGTGCACGAGTTGGGCGGATTGTTATGTCTGCAGCAGTTGAGCATCTGACGCCTGTGACTTTGGAGTTGGGTGGAAAATGCCCTGCACTGGTTGATTCCTTTTCAGCTTCTTGGGACAGAGAGAAGTTTCTTTTGTTGAATTACAAGGTGGCTGTGAAACGAATTTTGGTGTCAAAGTATGGGGCTTGTGCAGGACAAGCATGCATAGCAATCGATTATATCCTTGTAGAAAAGAGTTTCAGTTCCACATTGGTGGAATTAATGAAGGTATGGATTAAGAAAATGTTTGGAGAAAACCCAAAAGCATCTAAGACTATTGCAAGGATAGTTAATAAAAGACATTTATCAAGACTCAAGTGTCTTCTCGCTGAGCCTATGGTCAGAGAATCGGTGGTTTTTGGTGGTTACATGGACGAAGATGATTTATTTATGGAACCAACAATATTACTGGATCTGCCACTTGAATCACCAATCATGACAGAAGAAATCTTTGGCCCCCTGCTTCCAATTATCACTCTGGAGAAGATTGAAGATGGTATTGAATTCATAAACTCAAGGCCTAAGCCTCTAGCAATTTACGCCTTCACAAAAGACCAAACTCTGCAGAGAAGGATGTGGAAGTGTTGTATTCAACGATGCAAGATAACTCGTCTGTGTTTTGTGTAG 1242 0.4211 MEYSVEALERDLKNMRKYYGSGKTKEASWRELQLKGLHNFLMEKEEEILKALKQDLGKHHVEAYRDEVGTLMKSLNLARKSLKKWMASKEAKLPKIALLSSAEIVSEPLGLVLIISSWNFPIGLSLEPLIGAVAAGNSVVLKPSEISPACSSLLATVLPYYLDNNGINVIQGGPEVGEQLLQQRWDKIFFTGSARVGRIVMSAAVEHLTPVTLELGGKCPALVDSFSASWDREKFLLLNYKVAVKRILVSKYGACAGQACIAIDYILVEKSFSSTLVELMKVWIKKMFGENPKASKTIARIVNKRHLSRLKCLLAEPMVRESVVFGGYMDEDDLFMEPTILLDLPLESPIMTEEIFGPLLPIITLEKIEDGIEFINSRPKPLAIYAFTKDQTLQRRMWKCCIQRCKITRLCFV. 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08786 413 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 398 IPR016163 GO:0016620
Seca3g08786 413 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 216 IPR016162 GO:0016491
Seca3g08786 413 PIRSF ALDH 2 406 IPR012394 GO:0006081
Seca3g08786 413 SUPERFAMILY ALDH-like 12 398 IPR016161 GO:0016491
Seca3g08786 413 PANTHER ALDEHYDE DEHYDROGENASE 5 399 IPR012394 GO:0006081
Seca3g08786 413 FunFam Aldehyde dehydrogenase 16 221 - -
Seca3g08786 413 Coils Coil 42 62 - -
Seca3g08786 413 Pfam Aldehyde dehydrogenase family 9 396 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08786 Seca-Chr3 223457190 223461487 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08786 1 397 Aldehyde Dehydrogenase Gene Family AT4G36250 52.897 6.14e-157 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08786 K00128 - gmx:100819197 641.728