Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08742 ATGGTTAGCTTTGAATTTGAAGAAAAGGCTGATTCTATTAGTGAAAGAATGTCTAGGGAAAGATCTTGTAGGAAGGTCCAGACTCTGACTTCAGCACTTATTACACCAAGCAAGGCTACTAGCGGAATCTTGATTGAGCCAGAAAATCAGCCTGTGGACATTGATGCAGTCTATGCAAATGATGATCCAGAAGTAGCTGAATACCTTGATGATATATACAAATTCTATAAGCTATCAGAAGATAAGCACCAAGTTTCAGATTACATGAGATCACAGCCTGATATTAATGAGAAGATGAGGTTTATTACTGTGGACTGGCTGCTTGATGTGCATAGAAGATTTAAATTAATGCCTGAGACGCTATTTCTTACCATAAACATAATTGATCGGTACCTCTCATTGACAGTTGTACCAAGAACAGAATTACAGTTAGTGGGCATAAGCTCAATGTTCATAGCTAGTAAATATGAAGAAATTAAGCCTCCTCAGGTTAATGACTTTATTGGCATATCAAATAATGCTTACACCAAGAATCAAATCCTTTCCATGGAGAAAGTAATTCTGAATAAGTTAAAATGGTGTTTAACAATTCCCACACCCTATGTCTTTTTGGTTCGACTAATAAGAGCATCTGTTCAACCAGATCAGGAGATGGAGAACTTGGCCTTTTACCTAGCAGAACTTGGTCTTATGCACTATGAGGTCGTTATTTGGAACTACCCTTCAATGATTGCTGCTGCAGCTGTCTATTCTGCTAAATGTACACTCAATAGGCATCCTTTCTGGACTGAAACTCTACAGCACCAATCTGGTTACTGCACACAACAGATAAAAAACTGTGCAAAGCTACTTGTCTGCTTACACGCCAGTGCCAAAGATAGTAAAATCACAGCGTACTGCAAATTCTCAAGTGAAGACAGAGGATTTGTTGCTCTTTTATCTCCGCCAAAAGAAATATTCAAACATTTGTAG 972 0.3817 MVSFEFEEKADSISERMSRERSCRKVQTLTSALITPSKATSGILIEPENQPVDIDAVYANDDPEVAEYLDDIYKFYKLSEDKHQVSDYMRSQPDINEKMRFITVDWLLDVHRRFKLMPETLFLTINIIDRYLSLTVVPRTELQLVGISSMFIASKYEEIKPPQVNDFIGISNNAYTKNQILSMEKVILNKLKWCLTIPTPYVFLVRLIRASVQPDQEMENLAFYLAELGLMHYEVVIWNYPSMIAAAAVYSAKCTLNRHPFWTETLQHQSGYCTQQIKNCAKLLVCLHASAKDSKITAYCKFSSEDRGFVALLSPPKEIFKHL. 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08742 323 PIRSF Cyclin_A_B_D_E 2 323 IPR046965 GO:0016538|GO:0044772
Seca3g08742 323 Gene3D - 85 196 - -
Seca3g08742 323 Pfam Cyclin, N-terminal domain 71 195 IPR006671 -
Seca3g08742 323 SMART cyclin_7 202 286 IPR013763 -
Seca3g08742 323 SMART cyclin_7 105 189 IPR013763 -
Seca3g08742 323 SMART Cyclin_C_2 198 316 IPR004367 -
Seca3g08742 323 SUPERFAMILY Cyclin-like 61 193 IPR036915 -
Seca3g08742 323 Gene3D - 71 311 - -
Seca3g08742 323 PANTHER CYCLINS 40 292 IPR039361 -
Seca3g08742 323 SUPERFAMILY Cyclin-like 199 317 IPR036915 -
Seca3g08742 323 FunFam G2/mitotic-specific cyclin 84 196 - -
Seca3g08742 323 Pfam Cyclin, C-terminal domain 198 315 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08742 Seca-Chr3 222541252 222542985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08742 18 313 Core Cell Cycle Gene Families AT2G26760 53.535 1.15e-112 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08742 K21777 - jre:109013760 384.415