Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08715 ATGAATAAGGAACTTTCCAAATTGATGATTCAATTGGAATTAGATGCAGACAGAGGATTTAAAGGGAACGGGAGAGGAGGTGAAGTGAATCAACCCAAGCTATATAGAGGGCCAGCAAATCAGAAGGATATGAATTTGTTGAGGGACACTTTTTATAACTCTGCAGGGAAAGAGGGGAAATTCAGGGGAGACCCAAATTTATATGTGGTTGGTTGGGTTAATTTTGCATTTTATGCCACTGATTTTGGGTGGGGAAAACCTGTTTGTTTGGTTCCTGGGGGTATTAATTCTGATGGTAAGGCTTTCATTCTTAATACAGGAAGTGGTGATGGGTTTGTTGTGGCCATTTGTTTGCAACCTTCACATGTTGATGCTTTGAAGAAGTTGTTTTTATGA 396 0.3965 MNKELSKLMIQLELDADRGFKGNGRGGEVNQPKLYRGPANQKDMNLLRDTFYNSAGKEGKFRGDPNLYVVGWVNFAFYATDFGWGKPVCLVPGGINSDGKAFILNTGSGDGFVVAICLQPSHVDALKKLFL. 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08715 131 Gene3D - 38 131 IPR023213 -
Seca3g08715 131 Pfam Transferase family 56 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08715 Seca-Chr3 222075774 222076855 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08715 65 131 Monolignol Biosynthesis Gene Families AT5G48930 41.176 3.20e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08715 K13065 - gmx:100819383 141.354