Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08698 ATGATGGATTACCAATCTGGCCAGCCATTGGATTCAGATGACAGTGACCTTGATATGCAAGCAGAAAATAGTGAGGAACGTGAGAAAGTAGAAGATGAGTTTTCAAAAACTTTGGAATTATGTGTAGTTGAAGATGAAAAGTTTGTTGAACAACCTGTAGCAGAGACAGAAGCTTCAGAACCATTCATAGGCATGCAGTTCAATTCAAGAGAGGAAGCCAGAGAATTCTACATTGCCTATGGTAGGTGGATAGGATTTACAGTGCGAATACACCATAACCGTCGTTCACGAGTAAATAACCAGGTTATTGGTCAAGATTTTGTCTGCTCAAAAGAAGGTTTTCGTGCGAAAAAGTATATACACAGAAAAGATAGAGTGCTCCCTCCTCCACCAGCCACCCGAGAAGGTTGTCAGGCCATGATAAGGTTGGCTTTACGGGACGGAGGGATGTGGGTTGTCACCAAATTTGTGAAGGAGCATACTCATAAACTGATGAGTCCCAGTAAAGTTCCATGGCGAGGATCTGGGAAGCACTTGATTAGTGAGGATGAGAAAGATAAGAGAATCCGTGAGCTATCACTTGAGTTGCATAATGAAAGGCAGAAGTGCAAGCGACGTTGTGCTGCATATGAAGAACAGTTAAATATGATTCTGAACGATTTGGAAAAGCACACAGAACACATCTCTGAAAAAGTTGCTGATGTAGTCAGAAGAATAAGAGAAATTGAGGAGGAAAAATCAGATTCAGATGTCGGGTAA 759 0.4163 MMDYQSGQPLDSDDSDLDMQAENSEEREKVEDEFSKTLELCVVEDEKFVEQPVAETEASEPFIGMQFNSREEAREFYIAYGRWIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYIHRKDRVLPPPPATREGCQAMIRLALRDGGMWVVTKFVKEHTHKLMSPSKVPWRGSGKHLISEDEKDKRIRELSLELHNERQKCKRRCAAYEEQLNMILNDLEKHTEHISEKVADVVRRIREIEEEKSDSDVG. 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08698 252 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 20 245 - -
Seca3g08698 252 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Seca3g08698 252 Coils Coil 182 227 - -
Seca3g08698 252 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08698 Seca-Chr3 221880393 221881929 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g08698 FAR1 1.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08698 - - gmx:100810283 431.795