Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08689 ATGCAATTGAGGCAGAAACTAGGAGTCGTGGAAGCTAAAAAATTGCTGTCCAGAACTGTCTACGTATTTAGCATAAGAGGCAATGATTATGGCACCCCTTTCCTTACAAACTCAACTACTGCTGTGCTTCTTTCATACCCTCAACAACAATTCGTAGACTTTGTGATTGGCAACATTACTGCTGCAATCAAGGAAATTTATAATGAAGGTGGAAGGAAATTTGGGTTTGTAAATGTGGGTCCTTTAAATTGTTTCCCTCTTTTAAGGAGGCTCGTAAATGGAACAATGATAAGTGCCTGTTTGGAACAACAAGGTTCAGCACTTGCAAGACTACACAATAATGAGTATGTTTTCTTTGATGCTCTCCATCCAGCAGAGAGTGCTGCCAAGCATTTCGCCAAGCTAATGTGGCGTGGAAACAGAGATGTCATTGAATCTTACAATCTGAAACACTTGTTTCACGATGCTTGA 471 0.4034 MQLRQKLGVVEAKKLLSRTVYVFSIRGNDYGTPFLTNSTTAVLLSYPQQQFVDFVIGNITAAIKEIYNEGGRKFGFVNVGPLNCFPLLRRLVNGTMISACLEQQGSALARLHNNEYVFFDALHPAESAAKHFAKLMWRGNRDVIESYNLKHLFHDA. 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08689 156 Gene3D SGNH hydrolase 1 115 IPR036514 -
Seca3g08689 156 Pfam GDSL-like Lipase/Acylhydrolase 16 87 IPR001087 GO:0016788
Seca3g08689 156 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 113 154 IPR044552 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08689 Seca-Chr3 221737456 221738071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08689 2 99 Pollen Coat Proteome AT1G75910 27.551 4.50e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08689 - - var:108346412 141.354