Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08688 ATGCACGGAATTCACAAAAATAAAATTAATTTGCACAATCACGGACTTCGCTTCCTACGACAATCGAATTTGCGTCAGCCTCAGTTCTCAGTGGAGTTTGGGATTGATGGCTCTGCTCATGGTGAGACTGGGGGAAATGCTACTATGGGAGAGGTCAGTAGCAGCATAGCTGATGAAAACAAAATGGGCTGCAGTTCTTTCGAGCCAACTTATAAACAAGATCAAGATGATAATATAACTCAAGATTCTTCTGGAGCGGACACAATCCCGTCAGCAATTCCTGCAGTATCAGTTGTGTCAGCTGATGAACCTTATGTTGGTCAGGAGTTTGATTCAGAAGCTGCAGCGCATGCATTTTATAATGCATATGCTACACGTGTTGGATTCATCATACGTGTAAGTAAGCTCTCACGATCAAGGCGTGATGGAACTGCCATTGGACGGGCTCTTGTTTGCAACAAAGAAGGTTACAGAATGCCTGACAAGCGTGAAAAGATTGTAAGACAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTTTAGTGAGGAAAGTAAGTTCGGGTAAATGGGTTGTTACGAAGTTTGTAAAGGAACACACACATCCTCTGACACCTGGAAAGGGTAGAAGGGATTGCATTTATGAGCAATATCCGGTCAGTTCATGTTCTTTCTTTACTGAAAGATGGTACATATTATGTTTATTCAATTAA 714 0.423 MHGIHKNKINLHNHGLRFLRQSNLRQPQFSVEFGIDGSAHGETGGNATMGEVSSSIADENKMGCSSFEPTYKQDQDDNITQDSSGADTIPSAIPAVSVVSADEPYVGQEFDSEAAAHAFYNAYATRVGFIIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTPGKGRRDCIYEQYPVSSCSFFTERWYILCLFN. 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08688 237 Pfam FAR1 DNA-binding domain 119 205 IPR004330 -
Seca3g08688 237 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 45 206 - -
Seca3g08688 237 MobiDBLite consensus disorder prediction 63 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08688 Seca-Chr3 221732241 221736051 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g08688 FAR1 1.3e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08688 - - gmx:100806900 332.413