Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08660 ATGAGGAGAATAATGTGTGTGGCTTTCCCACTAGTAGCTCTTGTAGTGCTGAGCTTGTGTCATGGGATGGCAGGTGCAACGGCACCTGCAAGGTCAAAGTTGCAGTGGCATTACTATAAGATGCAAAATACATGCCGCGACGCAGAGGTGTATGTCCGGCACCAAGTGAAGCTGCTTTGGGATCATGACAAAACCATTACCGCAAAGCTCCTCCGCTTGGTTTATTCAGACTGTTTTGTCACTGGCTGTGATGCATCAATACTGCTTGACGAAGGATCAAAAACAGAAAAGGCAGCACCACAAAACCGGGGGCTTGGAGCATTTGTTATAATTGACAAGATCAAAGCTGTTCTAGAAGCACGATGCCCTGGAATTGTCTCCTGTGCCGATATACTCCAACTCGCCACCAGGGATGCTGTTCAACTGGCAGGTGGACCAGGTTATCCAGTTTTCACCGGAAGAAAGGATGGCATGCAATCAGATGCTGCATCAGTAGACCTGCCATCACCATCCATCTCATGGCAGGAAGCTCTAGCATACTTCCAATCGAGGGGCTTGGATGTACTTGACATGACAACACTCTTAGGAGCACACACAATGGGCCAAACACATTGTAGCTACATTGTTGATCGGCTGTATAATTACAATGGTACTAGAAACGCTGACCCAAGCATGAATGCTACTTTTGTAGACACAATGAAAAAACTTTGCCCGCCAAGGAAGAAAGGGCAACATGATCCACTAGTATATCTAAACCCAGAATCTGGATCAAAATACAAGTTCACAGAATCATACTACCAAAGGATCCTACGCCATGAAGCTGTACTAGGAATTGATCAACAACTCCTAAATGGCGATGACACTGAACAAATCACTGAGGAATTTGCTGCTGGATTGGAAGATTTTCGGAGATCTTTTGCTCTATCAATGTACAAGATGGGGAATATCAAAGTCTTAACAGGAAACCAAGGAGAGATACGCCGGAATTGTCGAAATACAAATAAGGGCAACCCAAAATAG 1020 0.45 MRRIMCVAFPLVALVVLSLCHGMAGATAPARSKLQWHYYKMQNTCRDAEVYVRHQVKLLWDHDKTITAKLLRLVYSDCFVTGCDASILLDEGSKTEKAAPQNRGLGAFVIIDKIKAVLEARCPGIVSCADILQLATRDAVQLAGGPGYPVFTGRKDGMQSDAASVDLPSPSISWQEALAYFQSRGLDVLDMTTLLGAHTMGQTHCSYIVDRLYNYNGTRNADPSMNATFVDTMKKLCPPRKKGQHDPLVYLNPESGSKYKFTESYYQRILRHEAVLGIDQQLLNGDDTEQITEEFAAGLEDFRRSFALSMYKMGNIKVLTGNQGEIRRNCRNTNKGNPK. 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08660 339 Gene3D - 38 334 - -
Seca3g08660 339 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g08660 339 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g08660 339 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g08660 339 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g08660 339 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g08660 339 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g08660 339 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g08660 339 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g08660 339 ProSiteProfiles Plant heme peroxidase family profile. 33 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g08660 339 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g08660 339 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g08660 339 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g08660 339 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g08660 339 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g08660 339 Gene3D Peroxidase, domain 2 168 313 - -
Seca3g08660 339 FunFam Peroxidase 168 313 - -
Seca3g08660 339 PANTHER PEROXIDASE 25-RELATED 16 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g08660 339 CDD secretory_peroxidase 33 331 IPR033905 GO:0004601|GO:0042744
Seca3g08660 339 Pfam Peroxidase 52 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g08660 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Seca3g08660 339 SUPERFAMILY Heme-dependent peroxidases 37 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08660 Seca-Chr3 221085580 221088523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08660 9 334 Peroxidase AT5G24070 65.060 3.69e-163 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08660 K00430 - gmx:100797875 536.569