Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08638 ATGGCGTACCAGACCCCCGATCACGAATCAGGTTCCGAACCCAACACCCAAACACGCCTCTACAACCCCTACAAGGACCTCGAGGTTCCCATTCGAAACCTCTACCAGCTCCCAACCTCCCCCGAATACCTCTTCGTCGAGGAGGCTCGCCGCAAACGTCGATCTTGGGGAGAGAACCTCACCTTCTACACCGGCTGCGGCTACCTCGCCGGTGCCGTTGGCGGTGCTGCCGTCGGACTCGTCGACGGCGTCAAATCCTTCGAGTCCGGCGACACCGCCAAGCTCCGAATCAACCGGGTACTTAACTCGTCCGGTCACTCTGGTCGGGCGTGGGGTAACCGTTTGGGCGTGATCGGGTTGCTTTACGCCGGTATCGAGAGCGGGATTGTGGCGGTGAGAGACACTGATGATGTGTGGAACAGCGTAGCAGCAGGGCTCGGCACTGGCGCATTGTATCGAGCGGCGAGAGGAGTGAGATCCGCGGCGGTGGCGGGTGCTGTTGGTGGAGTTGTGGTTGGAGTGGCTGTCACGGCGAAGCAGGCATTGAAACGTTACGTACCCATATGA 567 0.6032 MAYQTPDHESGSEPNTQTRLYNPYKDLEVPIRNLYQLPTSPEYLFVEEARRKRRSWGENLTFYTGCGYLAGAVGGAAVGLVDGVKSFESGDTAKLRINRVLNSSGHSGRAWGNRLGVIGLLYAGIESGIVAVRDTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGVAVTAKQALKRYVPI. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08638 188 Pfam Tim17/Tim22/Tim23/Pmp24 family 62 171 - -
Seca3g08638 188 PANTHER TIM23 30 177 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08638 Seca-Chr3 220683033 220683599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08638 7 188 Chloroplast and Mitochondria Gene Families AT1G72750 70.811 1.53e-81 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08638 K17794 - gmx:100813158 296.975