Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08630 ATGGAGTTTGAACCTGAGGCAACGGCCTATGAATTTTACAATGAGTATAATAAGAGAGTTGGGTTTGGTATTCGTCGAGAATATGAAAATAAAAGCAAAAAAGATGAAATTTTGACTTCAAGAAAATTCTCATGCTTCAAAGAGTGTAAACGAGGCGCTGACAAACGAGATCACTTGACGAAAGAGCCTAGAGCAAAAACCAGAACAAGATGTGAAGCCCGCATGGTTATTTCACTTGATCGGAAGATAGGGAAATACAAGGTTATTGACTTTATAGCTCAACATAATCACCCTCTTCAATTGACAAAATATGCTTATATTATTCGTTCTCATCGACACATTTATGAGTCACAAGCATCACACATTGTATTGGTAGATGCATCTGGATTAAAACCAAAAGATTTTCATGAATATGTGTCCATGCAATCTGGTGGAATTGATAGTATTGATTACACAAGACAAGACCATAAGAAATTAAGAATTACCTTCGAAATGGATGTTGAAGAGCAAATAACGAATATATTTTGGGCAGATGCACAAATGATAAATTATTATGGGTACTTTGGTGATGTCATCACTTTTGACACCACATACAAGACAAATAAGGATTATCGGCCCCTAGGAGTATTTGTTGGGCTTAATAATCAGAGGCAAACAATTGTTTTTGGGGCAACATTGCTATATGATGAAACAATCCCTTCTTTTCAATGGTTATTTGAAACTTTCCTCAAAACAATGGGTGGAGAAAAGCCAAAAACCATTCTAACCGATCAAGATGCAGCGATGGCTAAGGCTATTTCTTTAGTTATGCACTTGGCTAACCGATCAACATGCGGAATGAATTTTGTCATAGAAATATATATAAAAATAATAAAAACTAAAATTATAAACTTCAAAATTGTTAAATTAATATATCGTTTTAAAATATAA 930 0.3387 MEFEPEATAYEFYNEYNKRVGFGIRREYENKSKKDEILTSRKFSCFKECKRGADKRDHLTKEPRAKTRTRCEARMVISLDRKIGKYKVIDFIAQHNHPLQLTKYAYIIRSHRHIYESQASHIVLVDASGLKPKDFHEYVSMQSGGIDSIDYTRQDHKKLRITFEMDVEEQITNIFWADAQMINYYGYFGDVITFDTTYKTNKDYRPLGVFVGLNNQRQTIVFGATLLYDETIPSFQWLFETFLKTMGGEKPKTILTDQDAAMAKAISLVMHLANRSTCGMNFVIEIYIKIIKTKIINFKIVKLIYRFKI. 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08630 309 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 278 IPR031052 GO:0006355
Seca3g08630 309 Pfam MULE transposase domain 191 279 IPR018289 -
Seca3g08630 309 Pfam FAR1 DNA-binding domain 11 100 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08630 Seca-Chr3 220611812 220612839 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g08630 MULE 1.2e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08630 - - tpra:123895462 400.979