Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08616 ATGAGTCTTGGAAAGGTGGCTGTGTCTTTCACTCACACAATCAAAGCCATGAAGCCTTTCTCTTCCGTGATCCTTTCTGCCATGTTCCTTGGAGAGATGCCTACACCATGGGTGGTTGGTTCCCTTCTGCCCATCATCGGTGGAGTTGCACCGGTACGTATCTGCTACTGA 171 0.5029 MSLGKVAVSFTHTIKAMKPFSSVILSAMFLGEMPTPWVVGSLLPIIGGVAPVRICY. 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08616 56 Pfam Triose-phosphate Transporter family 1 50 IPR004853 -
Seca3g08616 56 PANTHER SOLUTE CARRIER FAMILY 35 1 50 - -
Seca3g08616 56 SUPERFAMILY Multidrug resistance efflux transporter EmrE 4 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08616 Seca-Chr3 220288325 220288815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08616 1 50 Antiporters AT5G33320 80.000 8.91e-23 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08616 K15283 - thj:104808313 95.1301