LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca3g08607	ATGGGGTTTAGTGTAAGAAAGGGGAAGGAATTGTATTATGATAGTGAGAAAAAGTTCATGCGCTCCAAATATTATTTTTGTTCCAAAGAAGGGTTTAAAAATAATGAAGCTGAAGGTGAAGTGGCATATGAAAGAGAAAAGTCAAGAACGGGTTGTAAAGAAATGGTGCGATTTAATGTGAATAAGGAAGGAGTTTGGAAAATTACACATTTGGTACTCAATCACAATCATGAGTTTGTGCCACCAGAGCAAAGACACTTGTTACGTTTTATGAGAAATGCATCTACTGTCAAAGGGGGCGTGATAAAGTCCATGGTGAATGCTGGTAAAAAAGTTACAAAGATTTGGAGTTATTTAGGAGAGGAAGTTGGTGGATTCGATAAACTTGGTTTGACTGTGAAAGATATGCAGAATTATGTCTACACTGAAAAGTTGAAATTGATTGAAGCCAAGGATGCTCAATCATTAGTGAATCTCTTGTGGATTAGACAAGCACAAGATCCAATGTTCTACTGCAGTGTACAATTAGACCAAGAGTCACGCCTCACAAATGTGTTGTGGAGAGATGGCAAATCCAAAGTTGATTATGATTGGTTTGGGGAAGTTGTGGTTTTTGATACCACTTATCGTACTGATAAATACAACTTGATTTGTGTAACATCCCAAATTTTATTAAGTAAAATAAAATTAATAAAATAA	699	0.3534	MGFSVRKGKELYYDSEKKFMRSKYYFCSKEGFKNNEAEGEVAYEREKSRTGCKEMVRFNVNKEGVWKITHLVLNHNHEFVPPEQRHLLRFMRNASTVKGGVIKSMVNAGKKVTKIWSYLGEEVGGFDKLGLTVKDMQNYVYTEKLKLIEAKDAQSLVNLLWIRQAQDPMFYCSVQLDQESRLTNVLWRDGKSKVDYDWFGEVVVFDTTYRTDKYNLICVTSQILLSKIKLIK.	233

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca3g08607	232	Pfam	FAR1 DNA-binding domain	1	81	IPR004330	-
	Seca3g08607	232	PANTHER	OS01G0519700 PROTEIN	2	214	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca3g08607	Seca-Chr3	220156214	220156912	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca3g08607		FAR1	1e-17	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca3g08607	-		-	tpra:123905334	340.117