Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08563 ATGGACAACCTTTGGATTTTGTTTATGACAACAGCATTTCTCTTGTCCACTCTGATCCTCATCCTGTACACCAACAACAGGAGGTTTACACTCAAAACCAAACACATAAAAAAACTTCCTTTAGGCACTTTTGGTTGGCCTTTTATCGGTGAAACCATTCAGTTTGTTTCTTCTGCTTACTCTGATCGCCCTGAGACCTTCATGGACAAGCGACGCCTCATGTATGGGAAGGTGTTTAAGTCACACATATTTGGAAGCCCTTCTATTGTTTCTACTGATGCAGATGTTAATAAGTTTATTCTGCAAAGTGATGCAAAGGTTTTTGTTCCTTCTTATCCCAAGTCTCTGACTGAGTTGATGGGGGAGTCTTCTATTTTACTCATTAATGGAAGCTTACAGAGAAGAATACATGGACTGGTTGGAGCTTTCTTCAAGTCTCCACAGCTTAAGGCTCAGATCACCAGAGACATGCAGAAGTATGTGCAAGAATCAATGGCAAATTGGAAGGAGGACCAACCTGTATACATACAAGATGAAACCAAAAATATTGCCTTTCAAGTACTAGTCAAGGCATTGATTAGTTTGAATCCAAGTGAAGAAATGGAGCTTCTGAAGAAACATTTTCAGGAATTCATCTCTGGCCTCATGTCTTTACCAATAAACCTGCCAGGAACTAGACTTTATCAATCTTTACAGGCAAGTCCAGCAAAAAAGAAAATGGTCAAATTAGTGAAGAGAGTTATTCAAAGTAGAAGAAATAGTGGCATCTCTAAAGTTCCAAAAGATGTAGTGGATGTGCTTCTGAATGATGCAAGTGAACAATTAACTGATGATTTAATAGCAGATAATATGATAGATATGATGATTCCAGGAGAGGACTCGGTGCCAGTTCTTATGACTCTTGCTATTAAGTATCTATCAGAATGCCCTGCTGCTTTGCAACAATTCACGGAGGAAAATGTGAAGCTTAAAAAACTCAAAGATCAACTTGGGGAGCCCTTGTGTTGGAAAGATTACTTATCATTGCCATTTACTCAAACAGTTATCACAGAAACTTTAAGGATGGGAAATATAATAATTGGAGTTATGAGAAAGGCCATGAAAGATGTTGAAATAAAAGGGTACTTAATACCAAAAGGATGGTGTGTATTTGCATATTTTAGATCAGTTCATCTAGATGACCAAAATTTTGACCAGCCTTACCAATTCAATCCATGGCGGTGGCAATTAGTGTTATGTATTCAGCTTTTAAATGATAAATTGGGGGGATCACAGGACAAAGACATGAGCAGTTGTAATTTCACTCCATTTGGAGGGGGGCAAAGGCTTTGCCCTGGCCTTGACTTGGCCAGGCTAGAGGCTTCTATCTTCCTACACCACTTTGTTACTCAATTCAGGTGGTATGCTGAAGAAGATACAATTGTGAACTTCCCCACTGTAAGAATGAAAAGGAGGATGCCAATCTTTGTGAGGAGAGTGGAATCTTGA 1488 0.3911 MDNLWILFMTTAFLLSTLILILYTNNRRFTLKTKHIKKLPLGTFGWPFIGETIQFVSSAYSDRPETFMDKRRLMYGKVFKSHIFGSPSIVSTDADVNKFILQSDAKVFVPSYPKSLTELMGESSILLINGSLQRRIHGLVGAFFKSPQLKAQITRDMQKYVQESMANWKEDQPVYIQDETKNIAFQVLVKALISLNPSEEMELLKKHFQEFISGLMSLPINLPGTRLYQSLQASPAKKKMVKLVKRVIQSRRNSGISKVPKDVVDVLLNDASEQLTDDLIADNMIDMMIPGEDSVPVLMTLAIKYLSECPAALQQFTEENVKLKKLKDQLGEPLCWKDYLSLPFTQTVITETLRMGNIIIGVMRKAMKDVEIKGYLIPKGWCVFAYFRSVHLDDQNFDQPYQFNPWRWQLVLCIQLLNDKLGGSQDKDMSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTQFRWYAEEDTIVNFPTVRMKRRMPIFVRRVES. 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08563 495 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08563 495 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08563 495 PRINTS P450 superfamily signature 145 158 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08563 495 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08563 495 PANTHER CYTOCHROME P450 26 37 468 - -
Seca3g08563 495 Gene3D Cytochrome P450 30 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08563 495 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 30 493 - -
Seca3g08563 495 Pfam Cytochrome P450 42 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08563 495 CDD CYP90-like 71 492 - -
Seca3g08563 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Seca3g08563 495 PRINTS E-class P450 group IV signature 39 56 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08563 495 PRINTS E-class P450 group IV signature 428 444 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08563 495 PRINTS E-class P450 group IV signature 342 358 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08563 495 PRINTS E-class P450 group IV signature 444 462 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08563 495 PRINTS E-class P450 group IV signature 391 409 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08563 495 SUPERFAMILY Cytochrome P450 37 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08563 Seca-Chr3 218947793 218952498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08563 26 466 Cytochrome P450 AT3G13730 65.471 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08563 K12638 - gmx:100797868 799.66