Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08554 ATGTCTTTCACTTATTTTCCTGTTCATCCCTTTAAGGACTTGTCCCTGCTGAATATAACAATCCCTGAATTCCTTCTGCTTCCCCCCTCCCCCTCCCCATTTCTGTCACTTACAAGAGACACTGCAAAGTACCGTCCATTGATGAAAACAAACTTGGTCAGCCATTCACTCAATTATGATATCCAAACTGGCACTCATGACCCATATGAAGATTGTGTTTCTGCCTTGAGACTGTACAAGAAAATACGGGGTCAAAGTCATCAGGATGAAGGCTACGGAGCATTGACTCCAAGTGACACCCTCCTTGGCATGTGTCATAGCTGGAAATCCAAGGAACTTGACAACCTCACACCAGATGAACTTTATGCCTTGTCAAGATCAGACTATAAGTGTTGGTGTTTGGATTTGAGGCCAAGATTGGCAACCTCAACCTGA 435 0.4414 MSFTYFPVHPFKDLSLLNITIPEFLLLPPSPSPFLSLTRDTAKYRPLMKTNLVSHSLNYDIQTGTHDPYEDCVSALRLYKKIRGQSHQDEGYGALTPSDTLLGMCHSWKSKELDNLTPDELYALSRSDYKCWCLDLRPRLATST. 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08554 144 Gene3D - 10 93 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08554 Seca-Chr3 218804313 218805605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08554 36 135 C2H2 Transcription Factor Family AT3G27970 44.444 6.45e-26 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08554 K18327 - gmx:100805841 164.851