Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca3g08549 | ATGAGTCGAGAACAACAGAAGCGAGGGAAGCAGGAAAAAGGTTCTGATGGTGCTGAGAAGGTTATTGTTGCCGTCAAGGCTTCAAAGGAAATTCCAAAGACTGCTCTTGTTTGGTCTCTAACTCATGTTGTTCAACCTGGGGATTGCATTACACTGCTGGTGGTTGTACCACCGCAAAGTTCAGGCCGAAGATTGTGGGGTTTTCCAAGGTTTGCTGGTGACTGTGCCAATAGTCACAAGAAGTCGACTCCAGGAACAACAAGTTCAGAACAGAAGAATGATATCACTGATTCTTGCTCTCAAATGATCCTTCAGCTCCATGATGTCTATGATCCAAACAAGATAAATGTCAAGATTAAAATTGTATCTGGATCACCCTGCGGATCAGTGGCTGCAGAAGCCAAGAAAGCCCAGGCCAACTGGGTTGTATTAGACAAACAGCTCAAACATGAGGAAAAACAGTGCATGGAAGAGCTGCAGTGCAACATTGTGGCTATGAAGCGTTCCCAGCCTAAGGTACTCCGCTTGAATTTGGTTGGATCACAAAAAAAGGATCTTGAAGAAGCTTGTTCATTACCTTCTGAGCGAGGTGAGATGCCTGGAAAACTGCCGAAAAAGAAGAATGATACTTTAAATTCCATAAAAGGACCAGTTGTCACTCCAACTAGCAGCCCCGAGCTAGGGACTCCATTTACTGCAACTGAAGCTGGTACCTCATCAGTTTCAAGCTCTGATCCAGGAACTTCACCTTTTTTTATCTCTGAGATGAATGCTGAGTCAAAGAAAGAGGAAACCATCAAAGAAAATCAAGAACTCGATGATACTATTTCAGACACAGACAGTGAGCATTTGTCCTCATCTTCAGCAAGCTTGAGATTCCAGCCATGGATCACTGATTTACTTTTACATCAACAATCATCTCAACATACAGAAGAAAGATCAGAGAGATCTCATAATAGGCTTCAATCGTCTACAACTAGAGCTCTGCTAGAGAAATTCTCAAGGCTTGACAGAGAAGCTGAAATTGAAATTTCAAACTACAAGACTGACTTGGATTTTGGTGGAAATGTAAGAGACGCAATAGCATTATCTAGAAATGCTCCGCCAGGTCCCCCTCCGTTATGTTCAGTATGTCAACACAAGGCTCCTGTTTTTGGAAAGCCTCCAAGATGGTTCAGCTATGCTGAGTTGGAGCTTGCCACTGGTGGATTTTCGCAAGCCAATTTCTTGGCAGAAGGAGGATTTGGATCTGTTCACAGAGGGGTTCTACCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATGTTGAATTTTGCTCGGAGGTAGAAGTCCTGAGCTGTGCTCAGCACCGAAATGTGGTTATGTTGATTGGGTTCTGTATAGAGGATAAGAGAAGGCTACTGGTTTATGAGTACATATGTAATGGATCATTGGATTCTCATTTATATGGGAGACAACGGAAACCATTAGAATGGTCTGCACGGCAAAAAATCGCTGTTGGAGCTGCTCGAGGGTTGAGATATCTTCATGAAGAGTGCAGGGTGGGTTGCATTATCCACCGTGACATGCGGCCTAACAACATTCTCATCACTCATGATTTTGAACCACTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACACAGGAGTGGAAACTAGAGTAATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGCCAAATAACTGAAAAGGCTGATGTTTATTCCTTTGGGGTGGTATTAGTGGAGCTTGTTACAGGGAGAAAAGCTGTGGATCTCAATCGACCCAAGGGACAACAGTGTCTTACGGAGTGGGCACGGCCACTGTTAGAAGAATATGCCATTGAGGAGCTGATTGATCCAAGGATGGGAAGTCACTACTCAGAGCATGAGGTCTCTTGCATGCTACATGCTGCATCATTATGCTTAAGGCGAGATCCTTATTGTAGACCACGCATGTCACAGGTTCTTCGAATACTAGAGGGTGACATGGTCATGGACTCAAATTGCATTTCAACTCCTGGTTATGATAACCGGAGTGGTTGA | 2088 | 0.4411 | MSREQQKRGKQEKGSDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPPQSSGRRLWGFPRFAGDCANSHKKSTPGTTSSEQKNDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPCGSVAAEAKKAQANWVVLDKQLKHEEKQCMEELQCNIVAMKRSQPKVLRLNLVGSQKKDLEEACSLPSERGEMPGKLPKKKNDTLNSIKGPVVTPTSSPELGTPFTATEAGTSSVSSSDPGTSPFFISEMNAESKKEETIKENQELDDTISDTDSEHLSSSSASLRFQPWITDLLLHQQSSQHTEERSERSHNRLQSSTTRALLEKFSRLDREAEIEISNYKTDLDFGGNVRDAIALSRNAPPGPPPLCSVCQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRKPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIEELIDPRMGSHYSEHEVSCMLHAASLCLRRDPYCRPRMSQVLRILEGDMVMDSNCISTPGYDNRSG. | 696 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca3g08549 | 695 | Gene3D | Transferase(Phosphotransferase) domain 1 | 480 | 685 | - | - | |
Seca3g08549 | 695 | MobiDBLite | consensus disorder prediction | 190 | 287 | - | - | |
Seca3g08549 | 695 | MobiDBLite | consensus disorder prediction | 304 | 324 | - | - | |
Seca3g08549 | 695 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 480 | 683 | - | - | |
Seca3g08549 | 695 | Gene3D | Phosphorylase Kinase; domain 1 | 375 | 479 | - | - | |
Seca3g08549 | 695 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 376 | 479 | - | - | |
Seca3g08549 | 695 | MobiDBLite | consensus disorder prediction | 306 | 320 | - | - | |
Seca3g08549 | 695 | MobiDBLite | consensus disorder prediction | 213 | 255 | - | - | |
Seca3g08549 | 695 | Pfam | Protein kinase domain | 408 | 671 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca3g08549 | 695 | MobiDBLite | consensus disorder prediction | 257 | 280 | - | - | |
Seca3g08549 | 695 | Coils | Coil | 255 | 275 | - | - | |
Seca3g08549 | 695 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 525 | 537 | IPR008266 | GO:0004672|GO:0006468 | |
Seca3g08549 | 695 | PANTHER | OS01G0750732 PROTEIN | 164 | 681 | - | - | |
Seca3g08549 | 695 | CDD | STKc_IRAK | 410 | 676 | - | - | |
Seca3g08549 | 695 | ProSiteProfiles | Protein kinase domain profile. | 404 | 680 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca3g08549 | 695 | SUPERFAMILY | Protein kinase-like (PK-like) | 388 | 678 | IPR011009 | - | |
Seca3g08549 | 695 | FunFam | Dual-specific kinase DSK1-like | 12 | 167 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca3g08549 | Seca-Chr3 | 218691019 | 218697159 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca3g08549 | 384 | 683 | Trihelix Transcription Factor Family | AT1G70460 | 53.420 | 3.72e-101 | 323 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_PERK-2 | Seca3g08549 | Pkinase | 5.1e-41 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca3g08549 | - | - | gmx:100789216 | 1280.39 |