Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08481 CTCGTGCTTTGGAGTTCCCTTGCCATCGATTTCGTCTTCATTGAGTCTCAGAGAATTCGGAAGCTCTTTGCATTCTCCTCAGGACAGCGTCAGACTCATTCGGAAGCGGTGCCACAAACCCGATCGCAAAGGTCATTAGAAGCCTTTTTTGCTGTTCTCATTGGTATAGTGGCACTGGCGTTCGCATGGATGTTTGGTGAAGCAAAGCCCAGTGGCAAGGAACTTCTTCTTGGCATTTTGGTTCCAAAACTCAGCTCCAGATCTATACAGCAGGCTGTTGGAGTTGTGGGCTGCCTTATAATGCCTCACAATGTGTTCTTGTATTCTGCTCTTGTTCAATCAAAAGGCAGATGTGTTGTAAGGGGAAACCTTGAGATTGGGAGTCTGAGAGAAGTTGATGTCAAGTCAGGGCTTCCTGCTACTACAAGTACAGAAAGATTGGAGCTCCTTGATGATGATGAGCATATTCTCAGCATCAGGATTATTGGTGGTGATCATAGACTTAGGCATTTGTCTTCCTTGAAGTGA 528 0.4583 LVLWSSLAIDFVFIESQRIRKLFAFSSGQRQTHSEAVPQTRSQRSLEAFFAVLIGIVALAFAWMFGEAKPSGKELLLGILVPKLSSRSIQQAVGVVGCLIMPHNVFLYSALVQSKGRCVVRGNLEIGSLREVDVKSGLPATTSTERLELLDDDEHILSIRIIGGDHRLRHLSSLK. 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08481 175 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 28 115 IPR001046 GO:0016020|GO:0030001|GO:0046873
Seca3g08481 175 PRINTS Natural resistance-associated macrophage protein signature 92 115 IPR001046 GO:0016020|GO:0030001|GO:0046873
Seca3g08481 175 PRINTS Natural resistance-associated macrophage protein signature 43 64 IPR001046 GO:0016020|GO:0030001|GO:0046873
Seca3g08481 175 Pfam Natural resistance-associated macrophage protein 39 117 IPR001046 GO:0016020|GO:0030001|GO:0046873
Seca3g08481 175 SUPERFAMILY Bet v1-like 119 172 - -
Seca3g08481 175 Gene3D - 108 174 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08481 Seca-Chr3 215792411 215795719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08481 44 115 Inorganic Solute Cotransporters AT2G23150 77.778 1.23e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08481 K21398 - gmx:100812381 130.183