Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08470 ATGGCATCCTTTTTGGTCGTCCTATGTACTTTTGCCATCATTTTCTTGGCTACTTCTGTTGAAGCTGCCAGGCAATTCAAAGTTGGTGATCATTTTGGTTGGCAACAACCTGCTCCCAATGATACTGCATTTTATATCCAATGGGCTGAAAGGAACCGATTTCAAATTGGAGATTCTCTAGTTTTTGAGTACCAGAATGACTCGGTTCTTACTGTGGAGAAATTGGATTACTTTAATTGTGACTCAAGTGACCCCATCACTGCCTTTGACAATGGGAAGAGCACTCTTAATCTTGACAGATCTGGGGCCTTCTATTTCATCAGTGGAGCTGATGATCACTGCAGAAACGGCCAAAAACTACTTGTGGAGGTGATGGCCCCACATCCAATTCGAGAATCTCCACCATCCATTTCTCTTGCACCTGAAGGCATCCCAACGATGGCTCCTACACCTTCTGAATCATCTGAGGATAGCTTAGAGGTTTCTGCCTCAGTGGTGCTTAGTTCAATTTTTATGTCTCCTTTGGTCACATTTGTAATTATGATACTGTTAGCAGTAGCACTCTGA 567 0.4303 MASFLVVLCTFAIIFLATSVEAARQFKVGDHFGWQQPAPNDTAFYIQWAERNRFQIGDSLVFEYQNDSVLTVEKLDYFNCDSSDPITAFDNGKSTLNLDRSGAFYFISGADDHCRNGQKLLVEVMAPHPIRESPPSISLAPEGIPTMAPTPSESSEDSLEVSASVVLSSIFMSPLVTFVIMILLAVAL. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08470 188 MobiDBLite consensus disorder prediction 133 155 - -
Seca3g08470 188 FunFam Early nodulin-like protein 1 23 129 - -
Seca3g08470 188 Pfam Plastocyanin-like domain 39 118 IPR003245 GO:0009055
Seca3g08470 188 Gene3D - 23 133 IPR008972 -
Seca3g08470 188 PANTHER BLUE COPPER PROTEIN 22 151 IPR039391 GO:0009055
Seca3g08470 188 ProSiteProfiles Phytocyanin domain profile. 24 126 IPR003245 GO:0009055
Seca3g08470 188 SUPERFAMILY Cupredoxins 23 125 IPR008972 -
Seca3g08470 188 CDD OsENODL1_like 24 125 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08470 Seca-Chr3 215608012 215609005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08470 6 138 Phytocyanin Superfamily AT1G79800 52.555 9.86e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08470 - - gmx:102664880 231.106