Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca3g08436 | ATGGAGATTGAAGCTGACTCAAGAGATGGCTCTCTCATTCTGATCAAGCAAGGAGCTGAAGCTAGGGTTTTTGAGTCTTCTTTTGTAGGAAGGAGGTCTGTTATCAAGGAGCGCTTCTCAAAGAAGTACAGGCATCCAATTTTGGATTCTAAATTGACACTCAAGCGCTTAAATGCGGAGGCTAGGTGCATGACCAAAGCAAGGCGACTTGGGGTTTGTACTCCTGTGCTGTATGCTGTGGATCCTGTGTTGCACACTTTAACATTTGAATATGTTGAGGGCCCTTCAGTCAAGGATGTATTTCTTGACTTCGGGTCAAATGGTGTCATTGAAGAACGGATGGACAGCATTGCATCCCAAATTGGTGATGCAATTGGAAAATTACATGATGGTGGTCTTATTCATGGTGATTTAACAACATCAAACATGTTACTGAAGAATGATACCAATCAGTTGGTTCTTATTGACTTTGGTTTGAGCTTCACCTCGACTCTACCGGAAGATAAAGCTGTCGATTTGTATGTCCTGGAAAGAGCCATTCTTTCAATGCATTCTTCATGTGGGAATGTGATGGATAAGATACTTGCTGCATACCGCAAGTCATCAAAGCAGTGGTCATCCACATTGAACAAGCTGGCGCAAGTGCGACAAAGAGGACGAAAGAGGACCATGGTTGGATGA | 681 | 0.4332 | MEIEADSRDGSLILIKQGAEARVFESSFVGRRSVIKERFSKKYRHPILDSKLTLKRLNAEARCMTKARRLGVCTPVLYAVDPVLHTLTFEYVEGPSVKDVFLDFGSNGVIEERMDSIASQIGDAIGKLHDGGLIHGDLTTSNMLLKNDTNQLVLIDFGLSFTSTLPEDKAVDLYVLERAILSMHSSCGNVMDKILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG. | 227 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca3g08436 | 226 | Pfam | Protein kinase domain | 50 | 161 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca3g08436 | 226 | SMART | serkin_6 | 9 | 225 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca3g08436 | 226 | FunFam | TP53-regulating kinase isoform X1 | 20 | 92 | - | - | |
Seca3g08436 | 226 | FunFam | Protein kinase superfamily protein | 107 | 223 | - | - | |
Seca3g08436 | 226 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 133 | 145 | IPR008266 | GO:0004672|GO:0006468 | |
Seca3g08436 | 226 | ProSiteProfiles | Protein kinase domain profile. | 9 | 226 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca3g08436 | 226 | Gene3D | Phosphorylase Kinase; domain 1 | 20 | 92 | - | - | |
Seca3g08436 | 226 | SUPERFAMILY | Protein kinase-like (PK-like) | 14 | 174 | IPR011009 | - | |
Seca3g08436 | 226 | NCBIfam | KEOPS complex kinase/ATPase Bud32 | 18 | 220 | IPR022495 | GO:0004674 | |
Seca3g08436 | 226 | Gene3D | Transferase(Phosphotransferase) domain 1 | 106 | 223 | - | - | |
Seca3g08436 | 226 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 6 | 226 | IPR022495 | GO:0004674 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca3g08436 | Seca-Chr3 | 214783110 | 214785521 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca3g08436 | 2 | 160 | MAP Kinase Kinase Kinase | AT5G66710 | 28.834 | 1.07e-06 | 47.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-4 | Seca3g08436 | Pkinase | 2.8e-11 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca3g08436 | K08851 | - | csin:114273394 | 413.69 |