Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08421 ATGAACGGTGCAGGGAGACAGGGGCTGAGATCTGGTGCGACGGGGGTGCACCACCAGCGTCAGTACTCCGATAACTTTCTCGACGGCTCCTCCACCGGCAACCGGTGGCTCCAATCTGCCGGCCTTCAACACCTCCAATCCTCCGCCAACCCTCTTCCTCCGCTTCAGGACTATAACTTGTACGGCGGCGGAGCGCAGGGAGGGAGAATGTACAGGAATGCGCAGAGGAGCTTTAATGGAGGAACCGATTATTACATGGAACCCTCCACGCCACCCGGTGCTTACCGTACTTCAACGCAGAAAAAGAACGGCGAAGATTCTCCTGGTGATTTCAGCCCCGGCCTGTTGGATCTGCATTCATTTGACACTGAGCTTCTTCCTGAGATGCCAACCTCCAATGCATATGATGCCAACTCCCTGTATCAACCTATGCGGGGTAGAAGCTTTGATGACTCTGATCCTTACATGATGAACAAACAGGCTGCCAAAGCCCGTGCTCCTGAAAACATATTGAAAAGTTTTCCTGCAGAGAAAGAGAAATCAAGTTCTGTAGCAAAGATTAAAGTTGTGGTTCGTAAGAGACCAATGAATAAGAAGGAATTAGCAAAGAATGAAGAAGATATTATAGATACACATTCCAATTCTTTGACGGTACATGAAACTAAACTGAAGGTTGACCTAACTCAGTATGTGGAGAAGCATGAATTTGTTTTTGACGCTGTCTTGAATGAAGAGGTTACAAATGATGAGGTGTATCGTGAAACAGTGGAGCCCATAGTTCCAATAATCTTCGAACGCACTAAGGCAACTTGCTTTGCATACGGGCAAACAGGTGCTTTTCTAGGAAGTGGAAAAACTTATACAATGAAGCCACTGCCACTTAAAGCATCAAGGGACATCCTAAGATTGATGCACCATACTTACAGGAATCAGGGATTTCAATTGTTTGTGAGTTTCTTTGAAATATATGGCGGGAAGCTTTTTGATCTCCTTAACGATCGAAAAAAACTTTGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGATTGCAAGAGTACCGGGTATCTGATGTGGAGAATATCAAAGATTTGATTGAGAAAGGAAATGCCACAAGAAGTACAGGCACCACGGGTGCAAATGAGGAATCATCACGGTCACATGCAATACTTCAGCTTGCTATCAAGAGGTCAGTTGATGGCAATGAATCCAAACCTCCCCGTCTTGTTGGCAAGCTCTCTTTCATAGATCTTGCTGGAAGTGAGCGTGGAGCAGATACCACAGATAATGACAAACAGACAAGAATAGAAGGTGCTGAAATCAATAAGAGCTTACTTGCCCTAAAGGAATGCATAAGAGCTCTTGATAATGACCAAGGACACATCCCTTTCAGAGGCAGTAAACTGACTGAAGTTTTGAGGGATTCATTTGTTGGCAATTCCCGCACTGTTATGATATCATGCATATCACCAAGCACTGGTTCATGCGAACATACTCTGAATACATTAAGATATGCTGACAGGGTAAAAAGCTTGTCAAAAGGGAACAATTCGAAGAAGGATGTTTTGTCTTCGAATTTCAACCTTAAAGAATCAACTACGGTTCCCTTATCTTCCGTTACTGCATCAGTCTATGAGGATCGCACAGCTGATGCATGGAATGATGAAAATGAAGGAGATGATTTTAGCCCACCTGAAGAGTACTACGAGCAGGTGAAGCCATCATTGAAGAAAAATGTAAAGATGGAATCATTTACTACAACAGATGACAAATTGAAGAAACCTAGTGGTCAGATCAAATGGAAGGACCTCCCAAAAGTTGAACCTAAAACCACAAATTCAGAGGATGATTTAAGTGCCCTCTTACAGGAAGAGGAGGACCTTGTAAATGCTCACCGGACACAAGTAGAGGAGACTATGAATATTGTTAGAGAGGAGATGAACCTCTTGGTTGAAGCAGATCAACCAGGGAATCACCTGGATGATTATATATCTAGACTAAATGCCATTCTTTCTCAGAAGGCTGCTGGCATTCTGCAGTTGCAAACCCGTTTAGCTCATTTTCAGAAACGTTTAAAGGAGCATAATGTTTTGGTTTCATCTACTGGTTACTAA 2118 0.4363 MNGAGRQGLRSGATGVHHQRQYSDNFLDGSSTGNRWLQSAGLQHLQSSANPLPPLQDYNLYGGGAQGGRMYRNAQRSFNGGTDYYMEPSTPPGAYRTSTQKKNGEDSPGDFSPGLLDLHSFDTELLPEMPTSNAYDANSLYQPMRGRSFDDSDPYMMNKQAAKARAPENILKSFPAEKEKSSSVAKIKVVVRKRPMNKKELAKNEEDIIDTHSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFERTKATCFAYGQTGAFLGSGKTYTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVENIKDLIEKGNATRSTGTTGANEESSRSHAILQLAIKRSVDGNESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSTGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSSNFNLKESTTVPLSSVTASVYEDRTADAWNDENEGDDFSPPEEYYEQVKPSLKKNVKMESFTTTDDKLKKPSGQIKWKDLPKVEPKTTNSEDDLSALLQEEEDLVNAHRTQVEETMNIVREEMNLLVEADQPGNHLDDYISRLNAILSQKAAGILQLQTRLAHFQKRLKEHNVLVSSTGY. 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08421 705 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 513 IPR027417 -
Seca3g08421 705 MobiDBLite consensus disorder prediction 72 112 - -
Seca3g08421 705 MobiDBLite consensus disorder prediction 1 27 - -
Seca3g08421 705 Gene3D Kinesin motor domain 161 516 IPR036961 -
Seca3g08421 705 Pfam Kinesin motor domain 192 512 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g08421 705 FunFam Kinesin-like protein 168 516 - -
Seca3g08421 705 ProSitePatterns Kinesin motor domain signature. 412 423 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca3g08421 705 CDD KISc_KIF2_like 186 511 - -
Seca3g08421 705 PRINTS Kinesin heavy chain signature 266 287 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g08421 705 PRINTS Kinesin heavy chain signature 463 484 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g08421 705 PRINTS Kinesin heavy chain signature 413 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g08421 705 PRINTS Kinesin heavy chain signature 379 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g08421 705 PANTHER KINESIN-RELATED PROTEIN 6 572 700 IPR027640 GO:0003777|GO:0007018
Seca3g08421 705 ProSiteProfiles Kinesin motor domain profile. 186 513 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g08421 705 SMART kinesin_4 184 519 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g08421 705 MobiDBLite consensus disorder prediction 92 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08421 Seca-Chr3 214601655 214606951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08421 186 513 Calmodulin-binding Proteins AT5G65930 34.320 3.46e-42 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08421 K10393 - gmx:100810966 1277.69