Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08382 ATGCCCGAACCTGCCATGAATCTGCGCAAGGGCTCTAAGGTTTGGGTCCATGACAAAGATTGGGCTTGGTTGCCAGCAGAAGTACTCGAATATGCCGCGAATGGTTGTGGTGTAATTCGAGTGCTGATTTTGGGAGGTGCGTTGTTGCAGGTTCTTGCTCTTCCGGAGAAACTGTTTCTGAGGGATGCGGATGAAGACGAGCATGGAGGAGTGGAAGATATGACGAGGTTGGCTTACTTGAATGAACCAGGGGTGTTGTACAATCTTCGGAGAAGATATGCGCTGAATGATATTTATAATATAGTTAGCAATGGATTTGACTCTGTTACATTATTAGGACCAAATTCAAATAAGGTAATTTAG 363 0.4463 MPEPAMNLRKGSKVWVHDKDWAWLPAEVLEYAANGCGVIRVLILGGALLQVLALPEKLFLRDADEDEHGGVEDMTRLAYLNEPGVLYNLRRRYALNDIYNIVSNGFDSVTLLGPNSNKVI. 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08382 120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 102 IPR027417 -
Seca3g08382 120 Gene3D Kinesin motor domain 13 114 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08382 Seca-Chr3 213904982 213906785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08382 6 99 Myosins gene family AT4G33200 56.383 3.41e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08382 K10357 - gmx:100796413 138.658