Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08379 ATGTCACGTTTTAGAAAAGTGATAGAAGGCCTCAAACCTGCGTTTCTGATGGTGGTGGTTCAAGTTTTTTATGCTGGGGTTAGCATCTCGTACAAATTAACTACAAATGATGGAAAGAGCTTGAGTGTCCTTATGGCCTATCGCTTCCTTTTTTCATCGGCTTTCATGGTTCCTGTTGCCTACTTCCTTGAAAGGAAGAGCAAGCCAAAGATAACAGTACGAGTACTCGTTCAAGCATTTTTTTGTGCATTATTTGGGGCAACCTTACAACAAAATTTGTTCGTGGAAGCAGTATCTTTGGCAGGGGCAACATATGCTACGGCCATGTACAACCTCGTTCCAGGTGTTACCTTTATCTTAGCCGTGTGTTTTGGATTGGAAAGGTTGAACATTGGAACAACAACAGGGAAGGCCAAGGTACTTGGCACTCTAATGGGAATTGGTGGAGCCATGATGCTCACATTCTATAAGAGCATAGAGGTTCCCATCTGGCCAACGCTTGTGAACTTGATGAAACATGCACAGCCAGCAGAAGTGTCTTCTACTCATATTTGGGGCACTTCTCTTGCTATGGGCACCTGCTTATCATATTCTATATGGTTGATAGTTCAGGCTAGGATGAGTGAGAACTTTCCTTGGCATTATACAAGTGCAGCTTTGATGTCAGTGATGGCTGCCATTCAATCAATTATATTTGCTCTATGCATGGAAAGAAATAATTGGAGTCAATGGAAACTTGATTGGAATGTTAGACTTTTCACTATAGTTTATACGGTACCATATCAAGAGCCTTATTAA 798 0.416 MSRFRKVIEGLKPAFLMVVVQVFYAGVSISYKLTTNDGKSLSVLMAYRFLFSSAFMVPVAYFLERKSKPKITVRVLVQAFFCALFGATLQQNLFVEAVSLAGATYATAMYNLVPGVTFILAVCFGLERLNIGTTTGKAKVLGTLMGIGGAMMLTFYKSIEVPIWPTLVNLMKHAQPAEVSSTHIWGTSLAMGTCLSYSIWLIVQARMSENFPWHYTSAALMSVMAAIQSIIFALCMERNNWSQWKLDWNVRLFTIVYTVPYQEPY. 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08379 265 PANTHER WAT1-RELATED PROTEIN 13 258 IPR030184 GO:0016020|GO:0022857
Seca3g08379 265 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Seca3g08379 265 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08379 Seca-Chr3 213781422 213786746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08379 11 258 Nodulin-like Gene Family AT1G25270 35.458 8.24e-57 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08379 - - aprc:113856022 413.305