Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08332 ATGGAGAGCTTAAAAACACCTTTCAAGGGTATTTTAAACGATTTTCAAGCAAGAGCAGTGCACTATAAAGAAGATTGGACTTGTGGTCTCAGGTCAGGAATTGGGATATTGGCCCCAACTACCTATATTTTCTTTGCTTCTGCTTTACCTGTTATTGCCTTTGGCGAACAGCTCAGTAGAGACACAGATGGAAGCTTGAGCACGGTAGAAACACTGGCTTCTACAGCCATTTGTGGAATCATACACTCAATTTTGGGTGGCCAACCTCTTCTGATACTAGGAGTAGCAGAACCTACTATCCTTATGTACACCTATTTGTACAACTTTGCTAAAGATAAGGAAGGCTTGGGACAAGAACTCTTTTTGGCTTGGGCAGGATGGGTTTGTGTATGGACTGCTCTCTTGCTGTTTCTTCTAGCAATATTCAATGCTGGCTATATCATCAATAGGTTTACAAGGATTGCGGGTGAGCTTTTTGGCATGCTGATCACAGTCTTGTTCATTCAAGAGGCTATCAAGGGAATGGTGGATGAGTTTAGAATTCCTAAAGAGGGAGATCCAACATCGGACCAGTACCAATTTCATTGGCTGTATGCAAATGGATTGCTGGGTATTATATTCACCTTTGGTCTTCTCTATACTTCTTTAAAAAGCAGAAGAGCGAGGTCATGGTTATATGGGACAGGATGGTTAAGAAGTTTCATTGCAGACTATGGGGTGCCTTTAATGGTGGTGGTGTGGACAGCTCTATCATTCACAGTACCAAGTAAACTGCCTTCTGGAGTTCCCAGAAGGCTCATTGCTCCTCTGGCTTGGGAATCTACATCTTTACATCATTGGACAGATATGGGGAAGGTTTCTCCAGCATACATTTTTGCTGCTTTTATTCCTGCCTTAATGATAGCGGGGCTTTACTTCTTTGACCATAGTGTTGCTTCCCAAATGGCACAACAAAAAGAATTCAATCTAAGGAAACCTTCTGCATATCACTATGACATATTGTTGCTAGGATTCATGACTTTGCTTTGTGGATTAATTGGCTTACCCCCTTCAAATGGAGTTCTGCCTCAATCTCCTGTGCACACCAAGAGCCTGGCTGTTCTAAAGAGACAGTTGATCCGAAGAAAGATGGTTAAAAGTGCCAAGGAAAGCATAAGACAGAAAGCTAGCAACTCTGAAATGTATGGGAAGATGCAAGCAGTGTTTATAGAAATGGATAACAGTCCAGATAATCATTCAGTAGTCAAAGAACTAGAGGATTTGAAAGAGGTTGTTCTAAATGGTGAAGATAAAGGAGACAGAAATAATACATTTGATCCTGAGAAACACATTGATGCATATTTGCCTGTCAGAGTAAAGGAGCAGAGAGTGAGCAATCTCTTACAATCACTCCTTGTAGGAGCAGCAGTCTTTGCCATGCCTGCCATAAAAAAGATACCAACTTCAGTTCTGTGGGGATACTTTGCTTACATGGCTATTGATAGTCTTCCAGGGAATCAATTCTGGGAGAGGATACTACTTCTTTTTGTAGGACCTAGTAGGCGGTACAAATTGTTAGAAGGGGATCATGCATCCTTTGTTGAGTCAGTACCTTTCAGATACATAGTCTTCTTCACACTCTTCCAATGTATGTATTTCTTGGTTTGTTTTGGAGTGACATGGATTCCCATAGCTGGAATGCTGTTCCCCTTGCCTTTCTTTTTTCTGATCACATTGAGGCAGCATATACTCCCCAAGCTGTTCAGTCCACACCATCTTAGGGAACTAGACGCAGCTGAATATGAAGAAATAGCTGGTGCTCCAAGACTAAGTTTCAATATGTCTTTTAGGGAGGTGGAATCATCTCGAGTTGGATCAAAGGAAATAGGTAATGCTGAAATATTGGATGAATTAACTACTAATAGAGGGGAGTTGAAGGTTAGAGCTTTTAGCTTTAGTGAGGAAAGAAATAGCCAGGTTTATCCTGATGAGCAAATGGATCCACACTAA 1989 0.4133 MESLKTPFKGILNDFQARAVHYKEDWTCGLRSGIGILAPTTYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSILGGQPLLILGVAEPTILMYTYLYNFAKDKEGLGQELFLAWAGWVCVWTALLLFLLAIFNAGYIINRFTRIAGELFGMLITVLFIQEAIKGMVDEFRIPKEGDPTSDQYQFHWLYANGLLGIIFTFGLLYTSLKSRRARSWLYGTGWLRSFIADYGVPLMVVVWTALSFTVPSKLPSGVPRRLIAPLAWESTSLHHWTDMGKVSPAYIFAAFIPALMIAGLYFFDHSVASQMAQQKEFNLRKPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPVHTKSLAVLKRQLIRRKMVKSAKESIRQKASNSEMYGKMQAVFIEMDNSPDNHSVVKELEDLKEVVLNGEDKGDRNNTFDPEKHIDAYLPVRVKEQRVSNLLQSLLVGAAVFAMPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVGPSRRYKLLEGDHASFVESVPFRYIVFFTLFQCMYFLVCFGVTWIPIAGMLFPLPFFFLITLRQHILPKLFSPHHLRELDAAEYEEIAGAPRLSFNMSFREVESSRVGSKEIGNAEILDELTTNRGELKVRAFSFSEERNSQVYPDEQMDPH. 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08332 662 Gene3D Helical hairpin bin 18 60 - -
Seca3g08332 662 PANTHER ANION EXCHANGE PROTEIN 5 598 IPR003020 GO:0005452|GO:0006820|GO:0016020
Seca3g08332 662 Pfam HCO3- transporter family 7 179 IPR011531 GO:0006820|GO:0016020
Seca3g08332 662 Pfam HCO3- transporter family 200 371 IPR011531 GO:0006820|GO:0016020
Seca3g08332 662 Pfam HCO3- transporter family 450 540 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08332 Seca-Chr3 212678517 212683365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08332 1 657 Antiporters AT1G74810 71.622 0.0 984
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08332 K24194 - gmx:100811184 1147.5