Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08244 GCTGCTGGAATTCATGACTTACCTGGACTACCTGCTGGAGTGAAGTTTGATCCAACTGATAAGGAGATTCTTGAACATTTGGAAGCAAAGGTGTGCTCTGATATTCACAAGCTTCACCCTTTAATTGATGAGTTCATCCCAACTCTTGAAGGCGAGAATGAAAGCAAAGAAAGCCATTTAAAGAGGGTCATGCACCAGTACCACCTTGGCAATAATGAAGAGGAGAAGGAAGTTGGTAGTCTCCAAAGTTTTTATCAAACACAACCTAGACAATGTGGTGGTTCACTGATAAAAGACTCATTTCTTGCAAAATAA 315 0.4063 AAGIHDLPGLPAGVKFDPTDKEILEHLEAKVCSDIHKLHPLIDEFIPTLEGENESKESHLKRVMHQYHLGNNEEEKEVGSLQSFYQTQPRQCGGSLIKDSFLAK. 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08244 104 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 4 59 IPR044799 GO:0003700
Seca3g08244 104 SUPERFAMILY NAC domain 6 48 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08244 Seca-Chr3 210532138 210532703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08244 63 96 NAC Transcription Factor Family AT4G28500 72.973 3.91e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08244 - - gmx:100820039 107.842