Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08226 ATGAATGATGGTGGTTCTATGCAATTTGTGAACTCATGGGGTGAGATAGCAAGAGGCATATGCTTAAAAATTCAACCATTTCTGGACAGAACAATAATCAAAGCATGTAACCCTCCTAAAGTAGAGTTCCCATACCATGAATTTGCTATAATTGAAGATGTATCAGTACTCTTAACTTCTGTGTGGAATGATAGAACTAAAGCCTTAAGGATGCATCCTGAACAACAAGTGAAGCTACTTTTTGTTATTGATGAAAGGTCTAGTTTCGAGCCACCAACACTTTTTGATTATAACAAGGACTAG 303 0.3663 MNDGGSMQFVNSWGEIARGICLKIQPFLDRTIIKACNPPKVEFPYHEFAIIEDVSVLLTSVWNDRTKALRMHPEQQVKLLFVIDERSSFEPPTLFDYNKD. 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08226 100 Gene3D - 1 50 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08226 Seca-Chr3 210114525 210114954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08226 6 48 Monolignol Biosynthesis Gene Families AT5G48930 41.860 6.75e-09 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08226 K15400 - vvi:100854389 107.842