Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08197 ATGGCCCTCCCTGCCACCATGAAAGTTCTCGGAGTGGTTTTTGGGATTGTGTTGATAATTATTATGGGGATTTTGTCAGAAATTAGTGTGGAATTGTTAGTGCGTTTTTCTGTTTTGTGTAAAGCATCCTCTTATGGGGAGGTTGTTCAACATGCTATGGGAAAGCCTGCTAGGATTTTGTCTGAAATCTGTATTATAATGAATAATGCTGGTGTTTTGGTGGTTTACTTGATAATCATGGGGGATGTTATGTCTGGTTCTGTTCATCATATGGGGGTTTTTGATCAGTTATTGGGAAATGGGGTGTGGGATCAGAGAAAGCTTGTGGTTTTTGTTGTTATGGTGGTTTTTCTTGCACCCCTTTGTTCACTTGACAAGATTGATTCATTGAGTTTGACTTCAGCTGCCTCAGTTGCACTTGCTGTCATCTTTGTTGTCATTGCTTTTATTGTTGCTTTCATTAAGCTTGTTGAAGGAAAGATTGATACTCCAAGGATGACTCCTGATTTTAGCTCAAAAAAGGCCATATTGGATTTGCTAGTGGTGATTCCTATCATGACCAATGCATATGTTTGCCATTTTAATGTGCAGCCAATATACAATGAGCTTCAAGGAAGGTCTCCTCAGAAGATGAACCGAGTAGGAAGGATCACCACAATTTTGTGCATCCTAGTTTATGCTTCCACAGCTCTGTCAGGTTACCTACTATTTGGGGATGATACAGAATCTGATGTTCTAACTAATTTTGATAAGGATCTTGGAATTCGGTTTAGTTCAGCATTGAACTATATTGTCCGGGTTGGCTACATTCTCCATTTGATACTTGTCTTCCCTGTTATTCATTTCTCCCTACGCCAAACAGTGAATGCCTTGTTGTTTGAGAGATCACCTCCCCTATCAGAAAGTAGGAAGAGATCACTGGGGTTGACTTTTGTTCTGTTGGTACTCATATATATTGGCTCTACCATGATTCCAAACATTTGGACAGCTTTTAAGTTCACTGGGGCAACAACAGCTGTTTCATTGGGTTTTATATTTCCATCTCTTGTTGCATTAAGATTAAGTCATAAGGGAGATTTGAGCCATGGAGAATGGATTATATCATGGGTATTGTTGATATTGGCTGTGATTGTTAGCATAGTAGGAGTTGTTGGCAATGTCTATAGCATCCAGAGTAAGTCTCAATGA 1188 0.3948 MALPATMKVLGVVFGIVLIIIMGILSEISVELLVRFSVLCKASSYGEVVQHAMGKPARILSEICIIMNNAGVLVVYLIIMGDVMSGSVHHMGVFDQLLGNGVWDQRKLVVFVVMVVFLAPLCSLDKIDSLSLTSAASVALAVIFVVIAFIVAFIKLVEGKIDTPRMTPDFSSKKAILDLLVVIPIMTNAYVCHFNVQPIYNELQGRSPQKMNRVGRITTILCILVYASTALSGYLLFGDDTESDVLTNFDKDLGIRFSSALNYIVRVGYILHLILVFPVIHFSLRQTVNALLFERSPPLSESRKRSLGLTFVLLVLIYIGSTMIPNIWTAFKFTGATTAVSLGFIFPSLVALRLSHKGDLSHGEWIISWVLLILAVIVSIVGVVGNVYSIQSKSQ. 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08197 395 PANTHER AMINO ACID TRANSPORTER 1 378 - -
Seca3g08197 395 Pfam Transmembrane amino acid transporter protein 2 385 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08197 Seca-Chr3 208998231 209000482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08197 1 395 Amino Acid or Auxin Permease AAAP Family AT1G80510 78.283 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08197 - - gmx:100813328 621.698