Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08189 ATGCCTAAATTGGTTCTGAAAGCTGGGAGCAGACCTCCATGGGTAGGTCTTGCAGCTGCAGTTTGGATCCAAATTGCTGCTGGCAATGCCTACAACTTTCCCCTCTACTCCTCTGCGCTAAAATCCGTGTTGGGTCTCAACCAGCAGCAGGTGACTATTCTGGGAGTGGCCAATGATGTTGGGGAGAACGTGGGTTTGCTTCCTGGTATTGCCTGCAATAAGTTCCCTCCTTGGTCTTTGCTTCTGGTTGGTGCTGTGCTTTGTTTCTTCGGTTATGGGGTTATCTGGCTTGCTGTTAGCCAAACTGTCTCTGGTTTGCCTTATGTTCTGTTATGGCTTGCACTTTGTGTTGCCACTAATAGTAGTGCATGGTTTGGCACAGCTGTGCTTGTTACCAACATGAGGAACTTTCCTCTCAGTAGAGGGACCATCTCTGGCATTCTTAAAGGTTATGTTGGGATCAGTGCTGCAGTATATACATTAATATATAGCATGATACTGAAAGGATCTGCTTCTAAATTACTTTTGTTCCTAGCAATTGGAATTTCTATTGTATGTTTAGTTATGATGTACTTCATTCGGCCTTGTACTCCTCCTTCTGGGGAAGACTCTTCAGTGCATGTTCATTTTATTTTTACCCAAGCTGCAAGTATTATACTTGCCACCTATCTTGTTACGACCACAATAGTGAGTGATGTGGTTTCTATAAATGATGCTGTTTCTTACATCTTAGTTGCCATAATGGTTATACTTCTGATGACTCCCCTTGCAATTCCTGTCAAAATGACACTGTTTCCTGCCAATCCAAAGCACAGTGTTCCACTAGTTGGTTCTTCAGATCAGTTGCCATCAGCTGATGATGTTTCAACACAAACAACTCCATTGGTAACACCATCTTCCTCAGCTGCATATCTTGGAAGTTTTCATGAAACTGAGGATGCCTCAGATGTTGAGATGCTTATTGCAGAGGGGGAGGGAGCAATAAGGAAGAAAAGGAGGCCTAAAAGGGGAGATGATTTCAAGTTCCATGAAGCTTTAATCAAGGCTGATTTCTGGCTTCTTTGGTTTTCTTATTTTCTAGGAGTTGGCTCTGGAGTAACAGTTCTCAATAATTTGGCTCAAATTGGAGTGGCTTTGGGTGTAGAAGATACAACCATATTGCTGTCAGTATTCAGCTTTTGCAATTTTATGGGTCGTCTTGGTGCTGGTGCTGTTTCTGAACACTTTGTTAGGTTGATAACACTACCACGAACATTTTGGATGACAACAACACAAATAATTATGATCATAGCATTTTTCCTTTATGCTTCAGCTCTGGATGGCACTCTTTATGCTTCAACAGCTTTGCTTGGGATCTGTTATGGAGTTCAATATTCTATAATGGTTCCAACTGTTTCTGAGCTATTTGGTTTGAAGCACTTTGGTGTTATTAGTAGCTTCATGATGCTAGGAAATCCAATTGGTGCCCTTTTATTTTCTGTTTTCCTTGCTGGCAATGTGTATGATACAGAAGCTGCAAAGCAAGGAAACTCCACCTGCTATGGTGCAAATTGCTTTAGGCTCACTTTTCTGGTTTTGGCTGGTGTATGTGGACTTGGTACCATCTTGAGTATAATTTTGACAGTTAGAATACGGCCAGTATATCAAATGCTCTATGCAGGGGGTTCATTTCGTTTGTCTCAGACTTCTGATCACTGA 1698 0.4187 MPKLVLKAGSRPPWVGLAAAVWIQIAAGNAYNFPLYSSALKSVLGLNQQQVTILGVANDVGENVGLLPGIACNKFPPWSLLLVGAVLCFFGYGVIWLAVSQTVSGLPYVLLWLALCVATNSSAWFGTAVLVTNMRNFPLSRGTISGILKGYVGISAAVYTLIYSMILKGSASKLLLFLAIGISIVCLVMMYFIRPCTPPSGEDSSVHVHFIFTQAASIILATYLVTTTIVSDVVSINDAVSYILVAIMVILLMTPLAIPVKMTLFPANPKHSVPLVGSSDQLPSADDVSTQTTPLVTPSSSAAYLGSFHETEDASDVEMLIAEGEGAIRKKRRPKRGDDFKFHEALIKADFWLLWFSYFLGVGSGVTVLNNLAQIGVALGVEDTTILLSVFSFCNFMGRLGAGAVSEHFVRLITLPRTFWMTTTQIIMIIAFFLYASALDGTLYASTALLGICYGVQYSIMVPTVSELFGLKHFGVISSFMMLGNPIGALLFSVFLAGNVYDTEAAKQGNSTCYGANCFRLTFLVLAGVCGLGTILSIILTVRIRPVYQMLYAGGSFRLSQTSDH. 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08189 565 Gene3D MFS general substrate transporter like domains 348 548 IPR036259 -
Seca3g08189 565 Pfam Nodulin-like 13 260 IPR010658 -
Seca3g08189 565 CDD MFS_Mch1p_like 12 534 - -
Seca3g08189 565 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 549 - -
Seca3g08189 565 SUPERFAMILY MFS general substrate transporter 238 546 IPR036259 -
Seca3g08189 565 SUPERFAMILY MFS general substrate transporter 8 198 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08189 Seca-Chr3 208899985 208903792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08189 1 565 Nodulin-like Gene Family AT1G80530 62.898 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08189 - - psat:127087605 944.88