Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08187 ATGGCTTCAATTGAAGATGTTGTTGAGCCAAATATAATTGAAGGAAAGACATTCCGTGAACTATCTGAAAAAGACAAGGAACAAGTTGCTAAGAAAATAACAGTGATGGGAAGGTCTTCTCCAAATGACAAGCTTTTGCTGGTGCAAGCACTGCGTAAAAGTGGTGAAATTGTTGTTGTCATGGGAGATGACACCAATGATGCTCCTGCCCTTCATGAGGTTTGTATATTTCTTTGA 237 0.3924 MASIEDVVEPNIIEGKTFRELSEKDKEQVAKKITVMGRSSPNDKLLLVQALRKSGEIVVVMGDDTNDAPALHEVCIFL. 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08187 78 PANTHER CATION TRANSPORTING ATPASE 11 73 - -
Seca3g08187 78 SUPERFAMILY HAD-like 12 73 IPR036412 -
Seca3g08187 78 Gene3D - 1 76 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08187 Seca-Chr3 208872886 208873917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08187 1 78 Primary Pumps ATPases AT3G21180 75.641 4.90e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08187 K01537 - gmx:100777845 125.176