Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08165 ATGACTCAGCTTGCTGCTGTTGCTTGTCTCTCCCTTGCTGCCAAAGTGGAGGAGACTCAAGTTCCCCTTTTACTAGACCTTCAAGTGGAGGACAGTAGATACTTGTTTGAAGCTAAGACTATTAAAAGGATGGAGATTTTGGTACTTTCAACTCTTGGATGGAAGATGAATCCAGCAACATCTCTCTCTTTTGTTGATTATATCATAAGAAGACTTGGATTGAAGGATCATCTCTGCTGGGAGTACCTAAGGAGATGTGAGGGTGTTCTTCTCTCTGTCATTGGAGATTCTAGATTTATGAGTTATCTACCTTCTGTGTTGGCAACTGCTACAATGATGCATGTTGTCAATAGCGTGGAGCCTCATCTAGGAGTCGAATACCAAAGCCAGCTACTTGGTATTCTTGGAATCAACAAGGACAAGGTGGATGAATGTTGCAAGGTTATGTTGGAAGTGTGGTCAGGGTATGAGCAGGGGAAGCAATGCATCAAACGCAAGTTTGGGTCCATTCCTGGTAGCCCAAATGGCGTAATGGATGTGTCTTTTAGCTGTGATAGCTCCAATGACTCTTGGGCTGTAGCTGCTGCTTCTGTGTCATCCTCACCAGAGCCTTTGTCCAAGAAAACTAGGAGCTTCAACTAA 642 0.4408 MTQLAAVACLSLAAKVEETQVPLLLDLQVEDSRYLFEAKTIKRMEILVLSTLGWKMNPATSLSFVDYIIRRLGLKDHLCWEYLRRCEGVLLSVIGDSRFMSYLPSVLATATMMHVVNSVEPHLGVEYQSQLLGILGINKDKVDECCKVMLEVWSGYEQGKQCIKRKFGSIPGSPNGVMDVSFSCDSSNDSWAVAAASVSSSPEPLSKKTRSFN. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08165 213 SUPERFAMILY Cyclin-like 2 57 IPR036915 -
Seca3g08165 213 SMART Cyclin_C_2 59 186 IPR004367 -
Seca3g08165 213 FunFam CYCLIN D32 58 147 - -
Seca3g08165 213 Pfam Cyclin, N-terminal domain 2 57 IPR006671 -
Seca3g08165 213 CDD CYCLIN_AtCycD-like_rpt2 60 149 - -
Seca3g08165 213 SUPERFAMILY Cyclin-like 60 169 IPR036915 -
Seca3g08165 213 Gene3D - 58 147 - -
Seca3g08165 213 Pfam Cyclin, C-terminal domain 60 184 IPR004367 -
Seca3g08165 213 Gene3D - 2 57 - -
Seca3g08165 213 PANTHER CYCLINS 2 157 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08165 Seca-Chr3 208344169 208345076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08165 1 210 Core Cell Cycle Gene Families AT5G67260 53.953 5.97e-66 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08165 K14505 - gmx:100795892 308.145