Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08126 ATGTTGGTGTCCTTCTCAAACCAACTCATCTGTGCCCTGTTGCTCCTCGTTTCAGCCGCCACCGCCACCGACCACATTGTTGGTGCCAATCGTGGTTGGAACCCTGGCATCAACTACACTCTCTGGGCCAACAATCAAACTTTCTATGTCGGCGACTTCATCTCATTTAGGTACCAGAAGAACCAGTACAATGTGTTTGAGGTGAACCAAACTGGGTATGACAACTGCACAACTGAAGGGGCAGTTGGGAATTGGAGTAGTGGCAAGGATTTCATACTGCTGAATGACACCAAGAGGTATTACTTTATTTGTGGCAATGGCCAATGCTTCAATGGGATGAAGGTTTCAGTTCTTGTCCATCCTCTCCCTTCTCCTTCTGCTGCTAACCATTCAACAAATCATGAATCTGCTGCTCTGCATAGCTTCCAATGGGGACTCCCATCTCTTGTGCTTTCTTCTGCTTTAGTTTGGTTTGGTTGGAATTGGATCTAG 492 0.4675 MLVSFSNQLICALLLLVSAATATDHIVGANRGWNPGINYTLWANNQTFYVGDFISFRYQKNQYNVFEVNQTGYDNCTTEGAVGNWSSGKDFILLNDTKRYYFICGNGQCFNGMKVSVLVHPLPSPSAANHSTNHESAALHSFQWGLPSLVLSSALVWFGWNWI. 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08126 163 Gene3D - 21 123 IPR008972 -
Seca3g08126 163 ProSiteProfiles Phytocyanin domain profile. 23 121 IPR003245 GO:0009055
Seca3g08126 163 Pfam Plastocyanin-like domain 33 113 IPR003245 GO:0009055
Seca3g08126 163 PANTHER BLUE COPPER PROTEIN 21 128 IPR039391 GO:0009055
Seca3g08126 163 FunFam Lamin-like protein 21 122 - -
Seca3g08126 163 SUPERFAMILY Cupredoxins 22 120 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08126 Seca-Chr3 207440121 207441157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08126 2 162 Phytocyanin Superfamily AT5G15350 36.310 7.71e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08126 - - tcc:108660460 253.062