Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08114 ATGATTATAAACGTGAAGGAATCGACGATGGTGCGTCCGGCCGAGGAGACGCCACAGAGGGCGTTGTGGAACTCCAACGTGGATTTGGTGGTGCCGAATTTTCACACGCCTAGCGTGTATTTCTACAGGCCAAACGGCGCCTCTAATTTTTTTGACGCAAAGATTTTGAAGGACGCTCTGAGCAAGGCGCTTGTTCCTTTCTACCCAATGGCTGCACGTCTTCGCCGCGACGACGACGGACGTGTTGAGATTTTTTGCGACGGCCAAGGGGTCCTCTTCGTCGAGGCGGAAACCACTTCCTCCATCGATGATTTCGGAGACTTCGCTCCGACGCTTCAGCTCCGGCAACTCATCCCCGCCGTCGATTACTCTCCCGGCATCGAAACGTATCCGCTGTTGGTGTTGCAGGTAACATATTTCAAATGTGGAGGCGTATCATTAGGTGTTGGTATGCAACACCATGTAGCAGATGGAGCCTCTGGTCTTCACTTCATCAATTCATGGTCAGATGTTGCTCGTGGCCTGGATATTTCAATCCCACCATTCATTGACCGGACACTACTCCGTGCCCGGGATCCACCTCGACCTGTTTTTGATCACATTGAATACAAGCCCCCACCAGCAATGAAGACTCCCCTACAACCAGCTAAACCAGGCTCAGACAATGTCACTGTCTCTATCCTCAAATTGACCCGTGACCAGGTCAGCACCCTGAAGGGTAAGTCCAGAGAAGATGGCAACACAATCAGCTACAGCTCCTATGAGATGTTAGCTGGTCATGTGTGGAGAAGTGTGTGCAAAGCAAGAGCACTTCCTGATGATCAAGAAACCAAATTGTACATTGCAACTGATGGAAGGTCAAGGCTGCAACCTCCACTCCCACCAGGCTACTTTGGCAATGTGATCTTCACAACGACACCAATAGCAGTGGCAGGTGATCTCATGTCAAAACCAACATGGTATGCTGCAAGCAGAATCCATGATGCATTGTCAAGGATGGAAAATGAGTATTTGAGATCAGCTCTGGATTTTCTAGAGCTACAGCCTGATCTTAAAGCACTTGTTCGTGGGGCACACACTTTTAGGTGTCCAAATCTTGGTATAACTAGCTGGGTAAGGCTCCCAATTCATGATGCTGACTTTGGTTGGGGAAGGCCCATATTCATGGGACCTGGTGGGATTGCATATGAGGGGCTATCATTCTTAATTCCAAGCTCAACAAATGATGGGAGCATATCTTTGGCAATTGCTTTGCCGCCTGAGCAGATGAAGGTGTTTCAGGAATTGTTTTATGACATTTGA 1302 0.4885 MIINVKESTMVRPAEETPQRALWNSNVDLVVPNFHTPSVYFYRPNGASNFFDAKILKDALSKALVPFYPMAARLRRDDDGRVEIFCDGQGVLFVEAETTSSIDDFGDFAPTLQLRQLIPAVDYSPGIETYPLLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINSWSDVARGLDISIPPFIDRTLLRARDPPRPVFDHIEYKPPPAMKTPLQPAKPGSDNVTVSILKLTRDQVSTLKGKSREDGNTISYSSYEMLAGHVWRSVCKARALPDDQETKLYIATDGRSRLQPPLPPGYFGNVIFTTTPIAVAGDLMSKPTWYAASRIHDALSRMENEYLRSALDFLELQPDLKALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFLIPSSTNDGSISLAIALPPEQMKVFQELFYDI. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08114 433 Gene3D - 1 205 IPR023213 -
Seca3g08114 433 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 431 - -
Seca3g08114 433 Pfam Transferase family 3 431 - -
Seca3g08114 433 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Seca3g08114 433 FunFam Tryptamine hydroxycinnamoyl transferase 211 431 - -
Seca3g08114 433 Gene3D - 211 433 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08114 Seca-Chr3 207205862 207211278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08114 1 433 Monolignol Biosynthesis Gene Families AT5G48930 77.136 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08114 K13065 - gmx:100801923 807.749