Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08096 ATGGAGGGTGCAATTGAGGTGGATTGGCGAGATTTCTTTCCATACCTGAAATGGGTTCCAAATAGAAGCATGGAGATGAAAATTCAGAAATTGTATTTCCACAGAAAAGCTGTCATGAAAGCCTTAATGAATGAGCAGAAGAAGCGATTGACTTCAGGAAAGGAAGTGAATTGTTATTTTGACTATCTGATATCTGAAGCTAAAGAACTAACTGAAGAACAAATTTCCATGCTGATATGGGAGACCATTATTGAGACATCTGATACTACCTTAGTTACAACAGAATGGGCTATGTATGAACTTGCTAAAGACAAAAATCGTCAGAACCGTCTGTATGAGGAGCTTCAAAATGTATGTGGACATGAAAAAGTTACAGAAGACCAATTAGCTAAGCTACCTTACTTAGGGGCTGTATTCCATGAAACTTTAAGGAAGCATAGTCCAGCTCCAATTGTCCCACTAAGATATGTTCATGAAGATACTCAATTGGGAGGATATCATATTCCTGCTGGAAGCGAGATTGCAATAAATATATATGGATGTAACATGGACAGCAACAAGTGGGAAAATCCTTATCAGTGGACACCTGAGAGATTTCTTGATGAGAAATATGACCCCATGGATTTGTACAAGACCATGGCCTTTGGAGCAGGAAAGAGGATGTGTGCAGGCTCTCTTCAGGCCATGTTGATTTCTTGCACAGCAATTGGCAGATTGGTTCAGGAATTTGAGTGGGAGCTTGGACAAGGAGAGGAAGAGAATGTGGATACAGTGGGCCTTACCACTCACAGGCTCCATCCCCTGCTAGTAAAGCTCAAGCGAAGAAATCAGTAG 834 0.4101 MEGAIEVDWRDFFPYLKWVPNRSMEMKIQKLYFHRKAVMKALMNEQKKRLTSGKEVNCYFDYLISEAKELTEEQISMLIWETIIETSDTTLVTTEWAMYELAKDKNRQNRLYEELQNVCGHEKVTEDQLAKLPYLGAVFHETLRKHSPAPIVPLRYVHEDTQLGGYHIPAGSEIAINIYGCNMDSNKWENPYQWTPERFLDEKYDPMDLYKTMAFGAGKRMCAGSLQAMLISCTAIGRLVQEFEWELGQGEEENVDTVGLTTHRLHPLLVKLKRRNQ. 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08096 277 PRINTS E-class P450 group I signature 177 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08096 277 PRINTS E-class P450 group I signature 222 245 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08096 277 PRINTS E-class P450 group I signature 94 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08096 277 PRINTS E-class P450 group I signature 136 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08096 277 PRINTS E-class P450 group I signature 212 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08096 277 Pfam Cytochrome P450 9 256 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08096 277 SUPERFAMILY Cytochrome P450 9 275 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08096 277 Gene3D Cytochrome P450 1 277 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08096 277 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 215 224 IPR017972 GO:0005506|GO:0016705
Seca3g08096 277 PRINTS P450 superfamily signature 213 222 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08096 277 PRINTS P450 superfamily signature 85 102 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08096 277 PRINTS P450 superfamily signature 137 148 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g08096 277 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 1 276 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08096 Seca-Chr3 206486819 206492725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08096 1 275 Cytochrome P450 AT5G25900 65.942 5.31e-138 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08096 K04122 - gmx:100802970 510.76