Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08077 ATGGAAAGCATAGAGAATCTTCAAGCTGCTAGGAAGTGCTTGAAAACTAGTTTAGAAAAATCAAGTGCTATTGCTTCTGCATTAGATGAATCAGGATCAAGATTGAGGCTACTTAACCAGAGATGTCAATCCTTGGAAGCTGAACTTGGACCAATCTCTATGCAAAAGTGCTTATTTGTTGACATTGGAGACCAAATAGATAGTGTTCTTTGTTCTGCTGCTGCAGTCCTCAGGGTATTTGAAGCTGTTCGTCAGCTTGAAAATTCTCTCTTGACTGACCCCAGCTCTGATCTATGCACCTATGTCTCAGACACAAAGAAGCTTGAAGAAGCACTGAAGCTTCTCACTGATAATTGCAACTTAGCACATGGCTGGCTGCAGGGTATTTTTGAGTTCTTTCAAGAAAAAGCAATCACTAATGAGCATTGCCTATTGAATGTGAGGAAATCTTTGAGAATACTCCAAGAATTGAAGGCCATGGAAGAAGGTGCTCACCTTGATGGAGGTCTTCTAAGTTCTGCCTTTGACAAACTAGAGATTGAGTTCCACAGGCTTCTGATAACAAACACAATGCCTCTTTCTTTGGTTTCATTAGCATCATCCATTGGCCAGCATGCTAGCTTTACCACACAAGCTTGGCCAGATTCTGTAACAGGGAAGTTGCAGGCCATTGTTGAGAGATTAAATGCTAATGACAGGTTAGACAAGTGTAAATCTATATATGTTGAAGTTCGAGGTATGAATGCTAAGAGGAGTATGGAGACTTTAGATTTGAGTTACCTTGAGTTTTCAACAGCTGAATTTGAGGATTTAAATGCTATTGAGGGTTACATAGACCAATGGGGCTTGCATTTGGAGCTGGCTGTGAAGCACCTGCTTGAGATTGAGTACATTCTCTCTAGCAATGTCTTTGAGAAAATTGGTCCAGAAGCATGGATGGGATGTTTTGCAAAGATTGCCATTGAATCAGGAATTCTTTCTTTTCTTGAATTTGGAAGGAATGTTACTAGGAGTAAAAATGACCCCATCAAGTTGTTGAAGCTGCTTGACATATTCCGAGTCTTAAATGATCTGAGACTAAATTTCAACCAGCTTTTCAATGGGAAAGCTTGTGAAGAAATAAGAACTGTGACAAAGGATCTTATCAACAGAGCTGTCAATGGTGCCAGTGAGATATTCTGGCAACTTCCCACACAAGTGAAGTTATTAAGGCCAAGTTCTCCTCCTGCAGATGGCAGTGTTCCTAGGGTGGTAAGCTTTGTAACTGATTACTGCAATCAGTTACTTGGGGATACTTACAGATCACACTTGATACAGGTTCTAGAAATCCATCATAGTTGGAGAAATGAAGTATATGAAGAGGGTATTGTTTTCACCCAAATTTATAACATAATTAAGGAAATTGCTATTAATTTAGATGCTTGGTCAAGGGCCTATGAAGATATAACTTTGTCTTACTTTTTTATGATGAACAACCACTGCCATTTCTACAATTTGGGGGGCACTGAGGTTGGGAATCTGATGGGAGATTCTTGGCTAAGAGCACATGAACAATACAAGGACTACTATGCAGCACTTTATTTGAAGAATAGCTGGGAAAAACTTCTACCTATTCTCAAAGTTCAGAAAGATTTACTTTCATCCTCCGTGACTAGCCAAGATTTGGTCCAGAGACTAAAGGCTTTCAATCTAGCTTTTGATGAAAAGTATAAGAAGCAATCCAATTGGGCAATCATTGATGAGGTCATGAGGGAAAATATATGCAAGCATTTGGTGGAAGGCATTGTACCAACCTATAAGGCCTATGTGAAGAACTACAGTTTGTCAATAAAAAATGGTGCTAAGGCTGCAAAGAATATAAAATATTCAGCGCAGAGTTTGGAGAACGTGATTAGAACTCTGTTTCAGCCCAAACTGAGGAAGTGTGGGAGAACTAAACAATCAGACTTGATTAGTAAAATAAAACAAGGGAGCAATCAATTTCGTTTGGCTCTTAATGCACTATAA 2007 0.3926 MESIENLQAARKCLKTSLEKSSAIASALDESGSRLRLLNQRCQSLEAELGPISMQKCLFVDIGDQIDSVLCSAAAVLRVFEAVRQLENSLLTDPSSDLCTYVSDTKKLEEALKLLTDNCNLAHGWLQGIFEFFQEKAITNEHCLLNVRKSLRILQELKAMEEGAHLDGGLLSSAFDKLEIEFHRLLITNTMPLSLVSLASSIGQHASFTTQAWPDSVTGKLQAIVERLNANDRLDKCKSIYVEVRGMNAKRSMETLDLSYLEFSTAEFEDLNAIEGYIDQWGLHLELAVKHLLEIEYILSSNVFEKIGPEAWMGCFAKIAIESGILSFLEFGRNVTRSKNDPIKLLKLLDIFRVLNDLRLNFNQLFNGKACEEIRTVTKDLINRAVNGASEIFWQLPTQVKLLRPSSPPADGSVPRVVSFVTDYCNQLLGDTYRSHLIQVLEIHHSWRNEVYEEGIVFTQIYNIIKEIAINLDAWSRAYEDITLSYFFMMNNHCHFYNLGGTEVGNLMGDSWLRAHEQYKDYYAALYLKNSWEKLLPILKVQKDLLSSSVTSQDLVQRLKAFNLAFDEKYKKQSNWAIIDEVMRENICKHLVEGIVPTYKAYVKNYSLSIKNGAKAAKNIKYSAQSLENVIRTLFQPKLRKCGRTKQSDLISKIKQGSNQFRLALNAL. 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08077 668 PANTHER EXOCYST COMPLEX PROTEIN EXO70 142 635 IPR004140 GO:0000145|GO:0006887
Seca3g08077 668 Coils Coil 28 48 - -
Seca3g08077 668 Pfam Exo70 exocyst complex subunit 280 631 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca3g08077 668 SUPERFAMILY Cullin repeat-like 76 635 IPR016159 -
Seca3g08077 668 Gene3D Exocyst complex component Exo70 126 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08077 Seca-Chr3 205850038 205852044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08077 3 655 EXO70 exocyst subunit family AT4G31540 49.474 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08077 K07195 - gmx:100777662 961.059