Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08014 ATGCGTGTTCACTATACTGGGACGTTGCTTGATGGCACCAAGTTTGATTCTAGCAGAGATAGGGGAACTCCATTCAAATTCACGCTTGGACAAGGTGAGTGTAGTAATTTTTTTTTGGAAAATTGTGGTGTGGGTGTTCTGAATTGA 147 0.415 MRVHYTGTLLDGTKFDSSRDRGTPFKFTLGQGECSNFFLENCGVGVLN. 49
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08014 48 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 48 IPR001179 GO:0003755
Seca3g08014 48 SUPERFAMILY FKBP-like 2 35 - -
Seca3g08014 48 Gene3D - 1 42 IPR046357 GO:0003755
Seca3g08014 48 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 2 33 - -
Seca3g08014 48 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 2 34 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08014 Seca-Chr3 203501821 203503039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08014 1 32 Calmodulin-binding Proteins AT5G48570 93.750 4.73e-17 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08014 K09571 K01802 jre:109008514 69.3218