Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07972 ATGTTTGTGAGCACCCACTATGCTGGCAAGGAGGTCACCATGTCATTTCAAGAAGGAGAGACTTATAAAAAGGTTTTTGGCCCCGTTTTTGTCTACCTTAATTCTGCATCAAGTGATGTCCATTTCCAATCTCTATGGTCAGATGCTGTGCAACAGGTCATTATTATTATTTACCCCTAA 180 0.4056 MFVSTHYAGKEVTMSFQEGETYKKVFGPVFVYLNSASSDVHFQSLWSDAVQQVIIIIYP. 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07972 59 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07972 Seca-Chr3 202002661 202002840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g07972 1 53 Polysaccharide Lyase AT2G22620 56.604 4.51e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07972 K18195 - gmx:100801633 90.5077