Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca3g07938 | ATGCCAGGGAACAAGTACAACGGCGATTCTAATAACCACATACCAGATCGTGTTGAACGGCTTTTGAGGGATAGGGAGTTGAGGAAAAACACGAGGGCGATTTTGAATGAGTCGAGTGATAACAGTAACAGTAATAATGAAGGTTTAGAGCAGGAGCAGAGGTTGAAGGAAGAGGAAAAGTTAGGGGAAGTTGAAGGGGTGGGAGGGGGAAGGGTTGGGGAAGGATGTGAGAGAGGAGATGGGAAGCCTGTGAGACAGAGGCTTTTGGTGGTGGCAAACAGGTTGCCAGTGTCAGCAATTAGGAAAGGTGAGGATTCATGGTCTTTGGAGATAAGTGCTGGTGGCCTCGTGAGCGCCCTTTTAGGTGTGAAGGAGTTTGAAGCAAGGTGGATAGGTTGGGCTGGTGTTAATGTTCCAGATGAGATTGGACAGAAGGCACTTACTAAAGCATTGGCTGAAAAGATGTGCATCCCCGTATTTCTTGATGAAGAGATTGTTCATCAATACTATAATGGCTATTGCAACAACATCTTGTGGCCCCTTTTCCATTACCTTGGACTACCACAAGAAGACCGCCTTGCCACCACACGTAGTTTTCAGTCTCAGTTTGCAGCGTATGAGAAAGCAAATGAAATGTTTGCTGAAGTTGTGAACAGGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTCCTTCCAAAATGCTTAAAGAAATACAACAGCAAAATGAAAGTTGGATGGTTTCTCCACACTCCATTCCCATCTTCTGAAATTCACAGGACACTGCCATCTCGTTCGGAGCTCCTGCATTCTGTTCTTGCAGCTGATTTAGTTGGCTTTCACACCTATGATTATGCAAGACATTTTGTTAGTGCTTGTACTCGCATCCTTGGACTTGAGGGTACACCTTATGGGGTTGAGTATCAAGGGAAGCTGACTCGAGTTGCTGCATTTCCAATTGGGATAGACTCAGAACGATTTATACGTGCACTTGACCTTCCTCCAGTACAGGAGCACATGAAAGACTTACAAGAAAGATTTAAAGGAAGAAAGGTAATGTTAGGCGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAGAAAATTCTAGCATTTGAAAAATTTTTGGAAGAAAATGCTTATTGGCGTGATAAAGTCGTTTTGCTTCAAATCGCTGTGCCAACAAGAACAGATGTTCCTGAGTATCAGAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATTAATGGCAGATTTGGATCATTGACTACTGTTCCTATACATCACCTGGATCGCTCTCTTGACTTTTATGCACTATGTGCTGTGTATGCTGTTACTGATGTAGCACTAGTCACATCTTTGAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTGGCCTGCCAGGAGAAAAAGAAAGGGGTTCTTATTCTTAGTGAATTCGCTGGTGCAGCACAGTCTCTTGGTGCTGGGGCAATTCTTGTCAACCCCTGGAACATTACCGAAGTTGCGGCTGCAATTGCCAGGGCTCTGAATATGCCATCTGCAGAAAGAGAGAAGAGACATAAGCATAATTTTCTTCATGTAAAATCCCATACTGCTCAAGAATGGGCAGGAACTTTTGTAAGGTATGTGTATTATGATTTTCAGGAAAGATCCACATTACCTTATGAATCTTTGAATATTTGCAGCGAACTAAATGATACTGTTATTGAGGCACAACTAAGGACAAGACAAGTTCCACCCCGACTACCAACCAAGACTGCAATTGAACGTTATCTGCAGTCAACTAATAGATTGCTCATTTTGGGGTTGAATGGAACTTTAACTGAACCGGTCGAGAAAACAGGTGATCAGATTAAGGAAATGGAACTTAAGGTGCATCCAGAATTGAGACAACCCTTGATGGCACTTTGCAGTGATCCAAATACCACCATAGTAGTGCTCAGTGGAAGTGGTAGAAAAGTCCTAGATGATAACTTCAAAGAATATGATATGTGGTTGGCAGCAGAGAATGGGATGTTTTTACACCCTTCAAAGGGCGAATGGATGACAACAATGCCAGAGCATCTTAATATGGAATGGGTTGACAGCGTGAAGCATGTTTTTGAGTACTTCACAGAAAGAACACCTCGGTCACACTTTGATTTTGAAGAAAGGGAAACTTCACTTGTATGGAATTACAAATACGCAGATGTTGAGTTTGGAAAACTTCAAGCAAGGGACATGCTGCAGCATCTCTGGACAGGTCCTATTTCTAATGCTTCAGTTGAAGTTGTTCAAGGGAGCCGATCTGTTGAGGTGCGAGCTGTTGGTGTTACAAAGGGAGCAGCTATTGACCGCATCCTGGGTGAGATAGTCCACAGTAAATCCATGACATCACCAATTGATTATGTTCTTTGCGTAGGACATTTTCTGGGGAAGGATGAAGATATTTATGCCTTTTTTGAGCCGGATCTTCCTTCTGTTGGTGTGGGTTTTCCGCGAAGTAAGGTAACAACAGATGCAGTTAAGTATCCTGTTGAGAGGAGACCGTCTCCGAAGATCCCAGCTTGTGGTAAAAATGGACCAAAGTCATCTCAAAATAAGGCACCGAAGCCAGTGTCAAATTCTGAGAAGAAAACAAATAATCATGTCTGCAGTGCACCACGACGCCCTGCTCCTGAGAAGATATCATGGAACGTCCTTGACCTTAAGAAAGAGAATTACTTCTCATGTGCTGTTGGGAGAACTCGAACAAATGCACGGTATACACTTGGGTCATCAGATGATGTTGTTACATTTCTCAAGGAACTGGCGGATGCATCATAG | 2829 | 0.4316 | MPGNKYNGDSNNHIPDRVERLLRDRELRKNTRAILNESSDNSNSNNEGLEQEQRLKEEEKLGEVEGVGGGRVGEGCERGDGKPVRQRLLVVANRLPVSAIRKGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKMCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYEKANEMFAEVVNRHYEEGDVVWCHDYHLMFLPKCLKKYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPYGVEYQGKLTRVAAFPIGIDSERFIRALDLPPVQEHMKDLQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTTVPIHHLDRSLDFYALCAVYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIARALNMPSAEREKRHKHNFLHVKSHTAQEWAGTFVRYVYYDFQERSTLPYESLNICSELNDTVIEAQLRTRQVPPRLPTKTAIERYLQSTNRLLILGLNGTLTEPVEKTGDQIKEMELKVHPELRQPLMALCSDPNTTIVVLSGSGRKVLDDNFKEYDMWLAAENGMFLHPSKGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFDFEERETSLVWNYKYADVEFGKLQARDMLQHLWTGPISNASVEVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCVGHFLGKDEDIYAFFEPDLPSVGVGFPRSKVTTDAVKYPVERRPSPKIPACGKNGPKSSQNKAPKPVSNSEKKTNNHVCSAPRRPAPEKISWNVLDLKKENYFSCAVGRTRTNARYTLGSSDDVVTFLKELADAS. | 943 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca3g07938 | 942 | Gene3D | Glycogen Phosphorylase B; | 334 | 537 | - | - | |
| Seca3g07938 | 942 | CDD | GT20_TPS | 87 | 549 | IPR001830 | GO:0003824|GO:0005992 | |
| Seca3g07938 | 942 | SUPERFAMILY | HAD-like | 605 | 939 | IPR036412 | - | |
| Seca3g07938 | 942 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 86 | 549 | - | - | |
| Seca3g07938 | 942 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 | 695 | 777 | - | - | |
| Seca3g07938 | 942 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 82 | 940 | IPR001830 | GO:0003824|GO:0005992 | |
| Seca3g07938 | 942 | MobiDBLite | consensus disorder prediction | 29 | 79 | - | - | |
| Seca3g07938 | 942 | Pfam | Trehalose-phosphatase | 628 | 828 | IPR003337 | GO:0003824|GO:0005992 | |
| Seca3g07938 | 942 | NCBIfam | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | 87 | 549 | IPR012766 | GO:0003825|GO:0005992 | |
| Seca3g07938 | 942 | Pfam | Glycosyltransferase family 20 | 87 | 551 | IPR001830 | GO:0003824|GO:0005992 |
Showing 1 to 10 of 21 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca3g07938 | K16055 | - | gmx:100797320 | 1620.52 |
Showing 1 to 1 of 1 entries