Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g07919 ATGGATACAGATGTTAGAAAGGATGTGTCGAGGAGGATAATTAACTTGACAAGTGATGATATATGGGCTTTAGAGTTTGCTAGTGAAAACGATGCGTTCAATTTTTACTTTTCTTATGCAAAATGTCATGGATTTGCTATGAGGAAGGATGATGTACTTCGAGACAGTAAAGGGATGGTCATAATGCGGCAGTATTTATGTAGTAGGGCTGGTATGGGGACAAAAAGCATTCAAGCTAAGTTGAGAGTTAGGTTTGATTATAAGACGAGTAAATGGAAGGTTGTTTCATTTGAAGAATCTCACAACCATGATTTAACCCCTGCAAAGTTTGTACCTCTAATTCGTACATATCGGGGATTGACTGATGGGGACAAAGCCCAAGTGGATGCATTGCATGCTCATGGCATTAGACCTTGCCAGATTATGGGTTTTCTTGTTGATAAAAAAGGAGGGTATAGAAATGTTGGATTTTCAAAGAAAGATTTGTACAACTACATAGATGAGGTTAAGCGTGGTAAGATAAAAGATGGGGATGTTGTTGCTGGCATAAGTTATTTGCAAGGAAAGGCAGATAATAATCCAATGTTTTTTTTTTCAAGATTTTTATGTTTTGATGATGGTAAACTTACTCATCTATTTTGGCGTGATGCAAATAGTCGTGCGGATTTTCAATTTTTTGGGGATGTGCTTGCATTTAGTGCAACATACAAGAAGAACATATATAAATATCCATTGGCCATATTTTCTGGGAAAAATCACCACTCTCAAACAGTAATATTTGGGTGTGCACTCATTGCTGATGAAACAATTGATACTTATAAGTGGGTGTTAAGGATGTTTTCGGAAGCAATGTTCAACAAGCATCCAGTTGCAGTGCTGACTGATGGAGATGGTGCTATGAGGGAAGCTATTAAGGCAGTATTTCCAAATGCGTTTAACAGGTTATGTGGGTGGCACTTGAATAAGAATGCATGTGAAAATGTTAAGAATCCAAAATTTTTGGATGATTTCAAGAAAGCAATGTATAGTAATTTCACTCCAAATCAATTTGAAGAGTTTTGGGAGGAAGTGGTAAGCAAACATGGTCTACAAGGTAATAGGTGGGTTATGAAAACCTATGATATCTCAATGTGA 1134 0.3686 MDTDVRKDVSRRIINLTSDDIWALEFASENDAFNFYFSYAKCHGFAMRKDDVLRDSKGMVIMRQYLCSRAGMGTKSIQAKLRVRFDYKTSKWKVVSFEESHNHDLTPAKFVPLIRTYRGLTDGDKAQVDALHAHGIRPCQIMGFLVDKKGGYRNVGFSKKDLYNYIDEVKRGKIKDGDVVAGISYLQGKADNNPMFFFSRFLCFDDGKLTHLFWRDANSRADFQFFGDVLAFSATYKKNIYKYPLAIFSGKNHHSQTVIFGCALIADETIDTYKWVLRMFSEAMFNKHPVAVLTDGDGAMREAIKAVFPNAFNRLCGWHLNKNACENVKNPKFLDDFKKAMYSNFTPNQFEEFWEEVVSKHGLQGNRWVMKTYDISM. 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g07919 377 Pfam FAR1 DNA-binding domain 34 106 IPR004330 -
Seca3g07919 377 PANTHER OS01G0519700 PROTEIN 23 373 - -
Seca3g07919 377 Pfam MULE transposase domain 229 323 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g07919 Seca-Chr3 199578461 199579647 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g07919 MULE 4.2e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g07919 - - ccaj:109792835 479.559